Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2673 ATGGCTTCAACCATCCTAAACCCTCCACTTGTTGCTTCAACCCTTTCTCCAAATGCTTCCCCTTCTGCAGTGCCTCCAGTATCTGCTGGTGTTTTATCACCACCTCCTCCTTCATCTTCCACACCACCATCTCCTCCCACTTCTCAGCCCAATGGAACATCCAATTCCCCTGCTCCTTCATCTCCTTCTGTCCCTTCAGCTCCACCTCCTGTAACACCTCCTCCTTCTCCACCCCTTTCTCCTCCACCGGTATCTACGCCACCTCCGGCTTCTTCCCCTCCTTCACCACCGGCTTCTCCACCACCTGCATCTCCACCACCACCAATTGCAACATCACCCCCACCACCAGCTACCACTTCCCCTCCTCCAGCTGAGACTTCACCTTCTGTTCCAAATTTGTCCCCACCACCTCCAGCAGCTGGTTCCCCTCCTCCTCAATCCTCAGAGGCACCTCCCACTCAACCGATTTCGCCATCTCCTCCTCCTCCAGCTAATGTGGCAAGGCCACCATCCACAAATTCCCCTCCTGCACCAGAGGCAAAGCCTCCTAAACGTTCCCCTTCACCGCCTGTACATGCATCCCCTCCATCAGTTTCTCAATCTCCTCCTTCTCCTTCCACTGATGTTCCCCCTCCATCCACATTGCCATCAACTCCTTCCACTGATGTTCCTCCTCCTTCAGTCCCTTCAGGCTCTTCACCTCCAGTTTCTTTGCCTGACCCCCCAACTAATAGAACATCAGCTGGGGGACCAGCTGTTTCTCTTCCCTCTATACCAACTGAGAAACCCACTGCTAGACCAACTAATGACGGCACTAATAATGTAGCCTCAAACACCACGCCTTCACCTTCAAGAGGGTTAAGTACTGGAGGAGCTGCGGCTATTGGCGTTGTAGTTGGTTTTATCGTCCTTAGCCTTCTTGTTATGGCTGTGTGGTTTGTACAGAAAAAGAAGAAGAAGGAAACAGAATCAAGGGGTGGTTATGCTATACCTTCTCCATTTGCCTCATCTCAAAATTCAGGTACTGTGTTCTTGAGGCCACAATCTCCTGCCAACTTTATAGGTAGTGCCTCTGGTAATGATTACGCATATTCCCCATCAGAGCCAGGTGGAGCAAGTGGTTCAAGATCATGGTTCACATATGAAGAACTTACACAAGCTACCAATGGGTTTTCTGCTAAAAATATGTTGGGAGAGGGTGGATTTGGTTGTGTCTACAAAGGTTTGCTAATTGATGGAAGAGAAGTGGCTGTTAAACAGCTCAAAGTTGGTGGTGGGCAAGGGGAACGTGAATTCAGGGCAGAAGTTGAGATTATTAGCCGTGTACATCATCGTCATCTGGTTTCCTTGGTGGGTTACTGTATAGCTGAACATCAAAGGTTGCTTGTCTACGATTTTGTTTCCAACGATACTCTTCATTACCATCTGCATGATGAAAACAGACCAGTTCTGGATTGGCCTACAAGAGTCAAGGTTGCTGCTGGTGCTGCTCGTGGAATAGCGTACCTACATGAAGACTGCCATCCACGCATTATTCATCGAGACATTAAGTCATCAAACATCCTTCTTGATCACAACTTTGAAGCTCAAGTTTCAGACTTCGGGCTTGCAAAATTGGCATTGGATACAAATACACATATAACAACACGTGTGATGGGAACCTTTGGGTACATGGCACCAGAATATGCAACAAGTGGGAAATTGACTGAAAAGTCCGACGTATATTCCTTTGGGGTTGTGCTTCTGGAGCTAATTACAGGTCGGAAACCTGTAGATGCCTCTCAGCCAATCGGTGATGAGAGCTTGGTTGAATGGGCCCGGCCTCTGTTGACTGAAGCGCTTGAAAACGAGGACTTTGACATTTTGGTGGATCCAAGACTAGGAAAGAACTATGACAAAAATGAGATGTTTCGGATGATTGAGGCGGCTGCAGCCTGCGTGCGCCATTCTTCAGTTAAGAGGCCGCGGATGAGTCAGGTAGTGAGAGCTTTAGATTCCTTAGATGAGTTTTTAGATCTCAACAACGGAATGAAACCCGGGCAGAGTTCAGTGTTTGATTCTGCACAACAATCTGCACAAATCAGAATGTTTAGGAGGATGGCTTTTGGTAGCCAAGATAATTCCACTTTCTTCAATGAGACTCAGAGTAGTTGGAGGAGCAGAGATCAGGACTCAACAACTGTATTCCCCCAAAACAAATCCGGCTCTTGGAACGTTTGA 2220 0.4802 MASTILNPPLVASTLSPNASPSAVPPVSAGVLSPPPPSSSTPPSPPTSQPNGTSNSPAPSSPSVPSAPPPVTPPPSPPLSPPPVSTPPPASSPPSPPASPPPASPPPPIATSPPPPATTSPPPAETSPSVPNLSPPPPAAGSPPPQSSEAPPTQPISPSPPPPANVARPPSTNSPPAPEAKPPKRSPSPPVHASPPSVSQSPPSPSTDVPPPSTLPSTPSTDVPPPSVPSGSSPPVSLPDPPTNRTSAGGPAVSLPSIPTEKPTARPTNDGTNNVASNTTPSPSRGLSTGGAAAIGVVVGFIVLSLLVMAVWFVQKKKKKETESRGGYAIPSPFASSQNSGTVFLRPQSPANFIGSASGNDYAYSPSEPGGASGSRSWFTYEELTQATNGFSAKNMLGEGGFGCVYKGLLIDGREVAVKQLKVGGGQGEREFRAEVEIISRVHHRHLVSLVGYCIAEHQRLLVYDFVSNDTLHYHLHDENRPVLDWPTRVKVAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDHNFEAQVSDFGLAKLALDTNTHITTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDASQPIGDESLVEWARPLLTEALENEDFDILVDPRLGKNYDKNEMFRMIEAAAACVRHSSVKRPRMSQVVRALDSLDEFLDLNNGMKPGQSSVFDSAQQSAQIRMFRRMAFGSQDNSTFFNETQSSWRSRDQDSTTVFPQNKSGSWNV* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2673 739 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 109 715 - -
Lja1g2673 739 ProSitePatterns Serine/Threonine protein kinases active-site signature. 511 523 IPR008271 GO:0004672|GO:0006468
Lja1g2673 739 MobiDBLite consensus disorder prediction 61 241 - -
Lja1g2673 739 MobiDBLite consensus disorder prediction 1 288 - -
Lja1g2673 739 SMART serkin_6 391 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g2673 739 ProSiteProfiles Protein kinase domain profile. 391 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g2673 739 MobiDBLite consensus disorder prediction 261 287 - -
Lja1g2673 739 SUPERFAMILY Protein kinase-like (PK-like) 370 664 IPR011009 -
Lja1g2673 739 Gene3D Transferase(Phosphotransferase) domain 1 467 678 - -
Lja1g2673 739 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 109 715 - -
Lja1g2673 739 Pfam Protein tyrosine and serine/threonine kinase 393 664 IPR001245 GO:0004672|GO:0006468
Lja1g2673 739 MobiDBLite consensus disorder prediction 1 23 - -
Lja1g2673 739 Gene3D Phosphorylase Kinase; domain 1 370 466 - -
Lja1g2673 739 ProSitePatterns Protein kinases ATP-binding region signature. 397 419 IPR017441 GO:0005524
Lja1g2673 739 MobiDBLite consensus disorder prediction 28 52 - -
Lja1g2673 739 PRINTS Proline rich extensin signature 34 46 - -
Lja1g2673 739 PRINTS Proline rich extensin signature 9 25 - -
Lja1g2673 739 PRINTS Proline rich extensin signature 81 97 - -
Lja1g2673 739 PRINTS Proline rich extensin signature 57 78 - -
Lja1g2673 739 MobiDBLite consensus disorder prediction 713 739 - -
Lja1g2673 739 CDD STKc_IRAK 397 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2673 Lja-Chr1 31612923 31619466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2673 294 606 Trihelix Transcription Factor Family AT1G26150 67.722 2.88e-152 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lja1g2673 PK_Tyr_Ser-Thr 3.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2673 - - gmx:100784873 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2673 1 31612923 31619466 Lja1g2673 1 31612923 31619466 ECH