Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2663 ATGGGCAAAAAAGACAAGGGGTGTGCCATTGGGATCGACCTTGGCACCACCTACTCGTGTGTTGCAGTTTGGAATGAGCAACATCGCAGAGTGGACATCATTCACAATGAACAAGGCAACCCAATTACTCCCTCCTTTGTTGCTTTCACAGATGATCAAAGGTTGATTGGTGTTGCTGCTAAGAATCAGGCTGCTACAAACCCTGAGAACACTGTTTTTGATGCTAAGAGGTTGATTGGTAGGAAGTACAGTGATCCCATTATAAAAAATGATATGATGTTATGGCCATTCAAGGTTATTGCGGGTGTTGATGACAAACCCATGATTGTTGTTAAGTATCACGGTAAGGAGAAGCATCTTTTTGCTGAAGAAATATCATCCATGGTTCTCACAAAGATGTGCGAAATTGCTGAGACATATCTGGAGTCACCTGTTAAGAATGCAGTTATCACTGTACCTGCTTATTTCAATGACTCTCAGCGCAAAGCTACCATAGATGCGGGTACCATTGCTGGTCTCAATGTTAAGCGGATAATCAATGAACCTACAGCTGCAGCTATTGCGTATGGCCTTGACAAGAGAAGTGATTGTAAGAAACCGCGAAATATATTCATCTTTGACCTTGGTGGTGGTACTTTTGATGTGTCTCTCCTTTCAATTAAAGGTAAGGACTTCAAAGTTAAAGCCACTGCAGGAAATACTCACTTAGGTGGAGAGGATTTCGATAATAGAATGGTGAACTACTTTGTAGAGGAGTTCAAAAGGAAGAGCAAATTGGATATTAGTGGAAATCCTAAAGCCCTGAGGAGGTTGAGAAGTGCTTGCGAGAGGGCCAAAAGGACACTCTCATCGACTACATGTACCACAGTTGAGGTAGATTGTTTGTATCAGGGCATTGATTTCTGTTCCTCAATCACTCGTGCAAGGTTTGAGGAACTTAACATGGACATGTTTAGAGAATGTATAGAAACAGTGGATAGGTGCCTCAATGATGCTAAGATGGACAAGAGTAGTGTAGATGATGTTGTCCTTGTTGGTGGCTCGTCTAGGATTCCCAAAGTGCAGGAGTTATTGCAGGAATTTTTCAAGGGGAAGGATCTCTGCAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCTGCTGTCCAAGCTGCTTTGCTGAGTGGAAGCATTAAGAATGTCCCAAACCTGGTGCTTTCCGATGTTACACCGCTGTCTCTTGGTACATCACTAAAAGGAGATATCATGAGTGTGGTGATTCCTAGGAATACTACCATTCCTGTCAAGAAGACAAAGGGTTACATGACAGTGAAAGATAACCAAACCAGTGTCTTGATTGCGGTTTATGAGGGTGAGAGAGCAATAGCCAGTGATAACAATTTGTTGGGTTCCTTTGTTCTTTCCGGCATTCCTCGTGCTCCTCGCGGAAATGGTCATGATATATGCTTTGCTATCGATGAAAATGGGGTTCTAACTGTTTCCGCTAAGGAACAAACCACTGGCAGTAAGAATGAGATCACCATAACCAATGACAAAGGGAGGCTGTCGACCCAAGAAATTAAGAGATTGGTTCAAGAAGCTGAGAGTTACCTGGCTGAAGACAAGCAATTCCTTAGGAAGGCCAATGCAATGAATTCTTTGGATGATTACATTTACAAGATGAAGAAAGCCTTGAAGAATGATTGTATTAATTTAAAGCTTAGCTCAAAAGAAAAGGAGAAGATCAGTTCTGCAATCACAAAGGCTACAAGTTTGCTTGATGGTGGTAATAATAAGGCATATGAAATACAGATTGAAAGAATGGGCAAAAAAGATGAGAAATGTGCCATAGGAATCGACCTGGGAACCACCTACTCGTGTGTTGCAGTTTGGCAGGAGCAACATCGCAGAGTGGACATCATTCACAATGAACAAGGCAACACAATTACTCCCTCCTTTGTTGCTTTCACAGATGATCAAAGGTTGATTGGTTTAGCTGCTAAGAATCAGGCTGCTACAAACCCTGAGAACATTGTTTTTGATGCTAAGAGGTTGATTGGTAGGAAGTACAGTGATCCCATTATAAAAAATGATATGATGTTATGGCCATTCAAGGTTATTGCGGGTGTTGATGACAAACCCATGATTGTTGTTAAGTATCACGGTAAGGAGAAGCATCTTTTTGCTGAAGAAATATCATCCATGGTTCTCACAAAGATGCGCGAAATTGCGGAGGCATATCTGGAGTCACCGGTTAAGAATGCAGTTATCACTGTACCTGCTTATTTCAATGACTCTCAGCGCAAAGCTACCATAGATGCGGGTACCATTGCTGGTCTCAATGTTAAGCGGATAATCAATGAACCCACAGCTGCAGCTATTGCGTATGGCCGTGACAAGAGAAATGATTGTAAGAAACCGCGAAATATATTCATCTTTGACCTTGGTGGTGGTACTTTTGATGTGTCTCTCCTTACAATTGAAGGTAAGGACTTCAAAGTTAAAGCCACTGCAGGAAATACTCACTTAGGAGGAGAGGATTTCGATAATAGAATGGTGAACTACTTTGTAGAGGAGTTCAAAAGGAAGAGCAAATTGGATATTAGTGGAAATCCTAAAGCCCTGAGGAGGTTGAGAACTGCTTGCGAGAGGGCGAAAAGGACACTCTCATGGACTACATGTACCACAGTTGAGGTAGATTCTTTATTTCAGGGCATTGATTTATGTTCCTCTATCACTCGTGCAAGGTTTGAGGAACTTAACATTGACATGTTTAGAGAATGTATAGAGACAGTGGATAAGTGCCTCAATGATGCTAAGATGGACCAGAGTAGTGTAGATGATGTTGTCCTTGTTGGTGGATCTTCTAGGATTCCGAAAGTGCAGGAGTTATTGGAGGAATTTTTCAAGGGGAAGAGTCTGTGCAAGAGTATCAATCCTGACGAGGCCGTTGCTTATGGTGCAGCTGTCCAGGCTGCTTTGTTGAGCAAAGGCATTAAGAATGTGCCTGACTTGGTGCTCTATGATGTTACACCGCTGTCTCTTGGTATTTGGATAAAAGGAGCTATCATGAGTGTGGTGATTCCAAGGAATACTACTATTCCTGTAAAGAAGACACACGGTTACAAGACAAGTGCAGATAACCAATCCAGTGTCCGGATTAAGGTTTATGAGGGTGAGAGAGCTAGAGCAAGTGATAACAATTTGCTCGGTTCCTTTGATCTTTCTGGCCTCCCTCCTGCTCCTCGTGGCCATCCTTTTGATGTATGCTTTGCTATAGATGAAAATGGCATTCTATGTGTTTCCGCTAAGGAAAAAACCACTGGCAGTAAGAATGAGATCACCATAACCAATGACAAAGGGAGGCTGTCGACCCAAGAAATTAAGAGATTGGTTCAAGAAGCTGAGAGTTTCCAGGCTGAAGACAAGCAATTCCTTAGGAAGGCCAATGCAATGAATTCTTTGGATGATTACATTTACAAGATGAAGAAAGCCTTGAAGAATGATTGTATTAATTTAAAGCTTACATCAGCAGAAAAGGAGAAGATCAGTTCTGCAATCACAAAGGCTACAAGTTTGCTTGATGGTGGTAATAATAAGGCATATGAAATACAGAAATGTGCCATAGGAATCGACCTGGGAACCACCTACTCGTGTGTTGCAGTTTGGCAGGAGCAACATCGCAGAGTGGACATCATTCACAATGAACAAGGCAACACAATTACTCCCTCCTTTGTTGCTTTCACAGATGATCAAAGGTTGATTGGTTTAGCTGCTAAGAATCAGGCTGCTACAAACCCTGAGAACATTGTTTTTGATGCTAAGAGGTTGATTGGTAGGAAGTACAGTGATCCCATTATAAAAAATGATATGATGTTATGGCCATTCAAGGTTATTGCGGGTGTTGATGACAAACCCATGATTGTTGTTAAGTATCACGGTAAGGAGAAGCATCTTTTTGCTGAAGAAATATCATCCATGGTTCTCACAAAGATGCGCGAAATTGCGGAGGCATATCTGGAGTCACCGGTTAAGAATGCAGTTATCACTGTACCTGCTTATTTCAATGACTCTCAGCGCAAAGCTACCATAGATGCGGGTACCATTGCTGGTCTCAATGTTAAGCGGATAATCAATGAACCCACAGCTGCAGCTATTGCGTATGGCCTTGACAAGAGAAATGATTGTAAGGACTTCAAAGTTAAAGCCACTGCAGGAAATACTCACTTAGGAGGAGAGGATTTCGATAATAGAATGGTGAACTACTTTGTAGAGGAGTTCAAAAGGAAGAGCAAATTGGATATTAGTGGAAATCCTAAAGCCCTGAGGAGGTTGAGAACTGCTTGCGAGAGGGCGAAAAGGACACTCTCATGGACTACATGTACCACAGTTGAGGTAGATTCTTTATTTCAGGGCATTGATTTATGTTCCTCTATCACTCGTGCAAGGTTTGAGGAACTTAACATTGACATGTTTAGAGAATGTATAGAGACAGTGGATAAGTGCCTCAATGATGCTAAGATGGACCAGAGTAGTGTAGATGATGTTGTCCTTGAGTTATTGGAGGAATTTTTCAAGGGGAAGAGTCTGTGCAAGAGTATCAATCCTGACGAGGCCGTTGCTTACGGTGCAGCTGTCCAGGCTGCTTTGTTGAGCAAAGGCATTAAGAATGTGCCTGACTTGGTGCTCTATGATGTTACACCGCTGTCTCTTGGTATTTGGATAAAAGGAGCTATCATGAGTGTGGTGATTCCAAGGAATACTACTATTCCTGTAAAGAAGACACACGGTTACAAGACAAGTGCAGATAACCAATCCAGTGTCCGGATTAAGGTTTATGAGGGTGAGAGAGCTAGAGCAAGTGATAACAATTTGCTCGGTTCCTTTGATCTTTCTGGCCTCCCTCCTGCTCCTCGTGGCCATCCTTTTGATGTATGCTTTGCTATAGATGAAAATGGCATTCTATGTGTTTCCGCTAAGGAAAAAACCACTGGCAGTAAGAATGAGATCACCATAACCAATGACAAAGGGAGGTTGTCGACCCAAGAAATTAAGAGATTGGTTCAAGAAGCTGAGAGTTTCCAGGCTGAAGACAAGCAATTCCTTAGGAAGGCCAATGCAATGAATTCTTTGGATGATTACATTTACAAGATGAAGAAAGCCTTGAAGAATGATTGTATTAATTTAAAGCTTACATCAGCAGAAAAGGAGAAGATCAGTTCAGCAATTACAAAGGCTACAAGTTTGCTTGATGGTGGTAATAATAAGGCATATGAAATACAGGTGCTTGAGGATTATCAACTTTGTGCTGAGGAAATATCATCCATGATTCTCACAAAGATGCGGGAGGTTGCAGAAGCATATTTGGCGTCACCTGTTAAGAATGCAGTCATTACTGTGCCTGCTTATTTCAATGACTCTCAGCGCAAAGCCACTATAGATGCTGGTGCTATTGCTGGTCTCAATGTTAAGCGGATAATCAATGAACCCACAGCTGCAGCTATTGCGCTATATAAATATATGTAG 5508 0.4199 MGKKDKGCAIGIDLGTTYSCVAVWNEQHRRVDIIHNEQGNPITPSFVAFTDDQRLIGVAAKNQAATNPENTVFDAKRLIGRKYSDPIIKNDMMLWPFKVIAGVDDKPMIVVKYHGKEKHLFAEEISSMVLTKMCEIAETYLESPVKNAVITVPAYFNDSQRKATIDAGTIAGLNVKRIINEPTAAAIAYGLDKRSDCKKPRNIFIFDLGGGTFDVSLLSIKGKDFKVKATAGNTHLGGEDFDNRMVNYFVEEFKRKSKLDISGNPKALRRLRSACERAKRTLSSTTCTTVEVDCLYQGIDFCSSITRARFEELNMDMFRECIETVDRCLNDAKMDKSSVDDVVLVGGSSRIPKVQELLQEFFKGKDLCKSINPDEAVAYGAAVQAALLSGSIKNVPNLVLSDVTPLSLGTSLKGDIMSVVIPRNTTIPVKKTKGYMTVKDNQTSVLIAVYEGERAIASDNNLLGSFVLSGIPRAPRGNGHDICFAIDENGVLTVSAKEQTTGSKNEITITNDKGRLSTQEIKRLVQEAESYLAEDKQFLRKANAMNSLDDYIYKMKKALKNDCINLKLSSKEKEKISSAITKATSLLDGGNNKAYEIQIERMGKKDEKCAIGIDLGTTYSCVAVWQEQHRRVDIIHNEQGNTITPSFVAFTDDQRLIGLAAKNQAATNPENIVFDAKRLIGRKYSDPIIKNDMMLWPFKVIAGVDDKPMIVVKYHGKEKHLFAEEISSMVLTKMREIAEAYLESPVKNAVITVPAYFNDSQRKATIDAGTIAGLNVKRIINEPTAAAIAYGRDKRNDCKKPRNIFIFDLGGGTFDVSLLTIEGKDFKVKATAGNTHLGGEDFDNRMVNYFVEEFKRKSKLDISGNPKALRRLRTACERAKRTLSWTTCTTVEVDSLFQGIDLCSSITRARFEELNIDMFRECIETVDKCLNDAKMDQSSVDDVVLVGGSSRIPKVQELLEEFFKGKSLCKSINPDEAVAYGAAVQAALLSKGIKNVPDLVLYDVTPLSLGIWIKGAIMSVVIPRNTTIPVKKTHGYKTSADNQSSVRIKVYEGERARASDNNLLGSFDLSGLPPAPRGHPFDVCFAIDENGILCVSAKEKTTGSKNEITITNDKGRLSTQEIKRLVQEAESFQAEDKQFLRKANAMNSLDDYIYKMKKALKNDCINLKLTSAEKEKISSAITKATSLLDGGNNKAYEIQKCAIGIDLGTTYSCVAVWQEQHRRVDIIHNEQGNTITPSFVAFTDDQRLIGLAAKNQAATNPENIVFDAKRLIGRKYSDPIIKNDMMLWPFKVIAGVDDKPMIVVKYHGKEKHLFAEEISSMVLTKMREIAEAYLESPVKNAVITVPAYFNDSQRKATIDAGTIAGLNVKRIINEPTAAAIAYGLDKRNDCKDFKVKATAGNTHLGGEDFDNRMVNYFVEEFKRKSKLDISGNPKALRRLRTACERAKRTLSWTTCTTVEVDSLFQGIDLCSSITRARFEELNIDMFRECIETVDKCLNDAKMDQSSVDDVVLELLEEFFKGKSLCKSINPDEAVAYGAAVQAALLSKGIKNVPDLVLYDVTPLSLGIWIKGAIMSVVIPRNTTIPVKKTHGYKTSADNQSSVRIKVYEGERARASDNNLLGSFDLSGLPPAPRGHPFDVCFAIDENGILCVSAKEKTTGSKNEITITNDKGRLSTQEIKRLVQEAESFQAEDKQFLRKANAMNSLDDYIYKMKKALKNDCINLKLTSAEKEKISSAITKATSLLDGGNNKAYEIQVLEDYQLCAEEISSMILTKMREVAEAYLASPVKNAVITVPAYFNDSQRKATIDAGAIAGLNVKRIINEPTAAAIALYKYM* 1836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2663 1835 PANTHER HEAT SHOCK PROTEIN 70KDA 606 1197 IPR013126 GO:0005524|GO:0140662
Lja1g2663 1835 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1551 1706 IPR029047 -
Lja1g2663 1835 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Lja1g2663 1835 SUPERFAMILY Actin-like ATPase domain 609 794 IPR043129 -
Lja1g2663 1835 PANTHER HEAT SHOCK PROTEIN 70KDA 1198 1391 IPR013126 GO:0005524|GO:0140662
Lja1g2663 1835 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 598 - -
Lja1g2663 1835 SUPERFAMILY Actin-like ATPase domain 198 390 IPR043129 -
Lja1g2663 1835 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 549 IPR029047 -
Lja1g2663 1835 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Lja1g2663 1835 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 393 545 IPR029047 -
Lja1g2663 1835 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 994 1146 IPR029047 -
Lja1g2663 1835 PRINTS 70kDa heat shock protein signature 661 669 - -
Lja1g2663 1835 PRINTS 70kDa heat shock protein signature 609 622 - -
Lja1g2663 1835 PRINTS 70kDa heat shock protein signature 639 651 - -
Lja1g2663 1835 PRINTS 70kDa heat shock protein signature 998 1017 - -
Lja1g2663 1835 PRINTS 70kDa heat shock protein signature 1078 1094 - -
Lja1g2663 1835 PRINTS 70kDa heat shock protein signature 940 956 - -
Lja1g2663 1835 PRINTS 70kDa heat shock protein signature 972 992 - -
Lja1g2663 1835 PRINTS 70kDa heat shock protein signature 749 769 - -
Lja1g2663 1835 PRINTS 70kDa heat shock protein signature 812 822 - -
Lja1g2663 1835 SUPERFAMILY Actin-like ATPase domain 801 989 IPR043129 -
Lja1g2663 1835 Pfam Hsp70 protein 1393 1754 IPR013126 GO:0005524|GO:0140662
Lja1g2663 1835 Pfam Hsp70 protein 1202 1388 IPR013126 GO:0005524|GO:0140662
Lja1g2663 1835 Pfam Hsp70 protein 610 1198 IPR013126 GO:0005524|GO:0140662
Lja1g2663 1835 Pfam Hsp70 protein 9 608 IPR013126 GO:0005524|GO:0140662
Lja1g2663 1835 ProSitePatterns Heat shock hsp70 proteins family signature 1. 1205 1212 IPR018181 -
Lja1g2663 1835 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 1145 1195 IPR029048 -
Lja1g2663 1835 Gene3D - 612 987 - -
Lja1g2663 1835 PANTHER HEAT SHOCK 70 KDA PROTEIN 1759 1830 - -
Lja1g2663 1835 SUPERFAMILY Actin-like ATPase domain 1201 1386 IPR043129 -
Lja1g2663 1835 PANTHER HEAT SHOCK 70 KDA PROTEIN 606 1197 - -
Lja1g2663 1835 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Lja1g2663 1835 Gene3D - 1747 1834 - -
Lja1g2663 1835 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Lja1g2663 1835 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 995 1150 IPR029047 -
Lja1g2663 1835 Gene3D - 1147 1199 IPR029048 -
Lja1g2663 1835 Gene3D - 546 611 IPR029048 -
Lja1g2663 1835 Gene3D - 194 368 - -
Lja1g2663 1835 SUPERFAMILY Actin-like ATPase domain 1391 1545 IPR043129 -
Lja1g2663 1835 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1546 1724 IPR029047 -
Lja1g2663 1835 Gene3D - 10 386 - -
Lja1g2663 1835 PANTHER HEAT SHOCK 70 KDA PROTEIN 1198 1391 - -
Lja1g2663 1835 Gene3D Actin; Chain A, domain 4 1405 1488 - -
Lja1g2663 1835 Gene3D - 1200 1400 - -
Lja1g2663 1835 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 544 594 IPR029048 -
Lja1g2663 1835 ProSitePatterns Heat shock hsp70 proteins family signature 3. 943 957 IPR018181 -
Lja1g2663 1835 SUPERFAMILY Actin-like ATPase domain 1746 1831 IPR043129 -
Lja1g2663 1835 PANTHER HEAT SHOCK PROTEIN 70KDA 1392 1760 IPR013126 GO:0005524|GO:0140662
Lja1g2663 1835 PANTHER HEAT SHOCK PROTEIN 70KDA 4 598 IPR013126 GO:0005524|GO:0140662
Lja1g2663 1835 PANTHER HEAT SHOCK PROTEIN 70KDA 1759 1830 IPR013126 GO:0005524|GO:0140662
Lja1g2663 1835 PANTHER HEAT SHOCK 70 KDA PROTEIN 1392 1760 - -
Lja1g2663 1835 Gene3D - 1266 1317 - -
Lja1g2663 1835 Gene3D - 674 729 - -
Lja1g2663 1835 Gene3D - 73 128 - -
Lja1g2663 1835 ProSitePatterns Heat shock hsp70 proteins family signature 2. 806 819 IPR018181 -
Lja1g2663 1835 ProSitePatterns Heat shock hsp70 proteins family signature 1. 613 620 IPR018181 -
Lja1g2663 1835 Gene3D - 795 969 - -
Lja1g2663 1835 Gene3D Actin; Chain A, domain 4 237 320 - -
Lja1g2663 1835 Gene3D Actin; Chain A, domain 4 838 921 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2663 Lja-Chr1 31314954 31387471 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2663 1 589 Calmodulin-binding Proteins AT3G12580 67.851 0.0 817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2663 K03283 - hbr:110636145 1344.33