Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2659 ATGCCTCTAACCTCTCCTTCCGTTCTATCCACCTCAACCCTTTTCAGCTTCCCTTCACGCCTCTCTGTTTCCCCTGTTCAGTGCGGCCTCAGAGAGCTCAGAACCCGTATAGAATCCGTGAAGAACACCCAGAAAATCACAGAGGCAATGAAGCTTGTGGCAGCTGCCAAAGTCAGAAGAGCTCAAGAAGCTGTTGTCAATGGAAGACCCTTCTCAGAGACCCTCGTTGAAGTCCTCTACAGCATCAACGAGCAGCTCCAAACCGAAGATGTCGACGTCCCTCTCACCAAGATCAGGCCAGTGAAGAAGGTTGCCCTGGTCGTTTGCACTGGAGATCGTGGACTCTGCGGTGGATTCAACAACTTCATCTTGAAGAAAGCTGAAGCCAGAATCAAAGAGTTGAAGGAACTTGGTCTGGAATACACCATCATCAGTGTCGGCAAAAAGGGTAACTCCTACTTCATTCGTAGACCTTACATTCCAGTTGATAGATTTCTTGAAGGTGGCACGCTTCCCACTGCCAAAGAGGCTCAAGCTATTGCAGATGATGTTTTCTCACTGTTTGTGAGTGAGGAGGTTGATAAGGTTGAGCTCTTGTACACGAAGTTTGTGTCATTGGTGAAATCTGACCCTGTGATTCATACTCTGCTTCCTCTGTCACCAAAAGGAGAAATCTGTGACATCAATGGGAACTGTGTGGATGCTGCTGAGGATGAACTGTTCAGGTTAACAACCAAGGAAGGGAAATTGACTGTGGAGAGAGATACCTTTAGGACTAAAACTGCAGAATTCTCACCGATTTTGCAGTTTGAGCAGGACCCTGTTCAGATCCTTGATACTCTGCTTCCTCTGTATTTGAACAGTCAAGTGTTGAGGGCGTTGCAGGAGTCACTTGCGAGTGAGCTCGCTGCGCGAATGAGCGCGATGAGTAATGCGAGTGATAATGCCAGTGACTTGAAGAAGAACTTGTCAACTGTGTATAACAGGCAGCGTCAGGCGAAGATCACAGGAGAAATTCTGGAAATTGTTGCTGGTGCTAATGCCCTTGAATAG 1053 0.4748 MPLTSPSVLSTSTLFSFPSRLSVSPVQCGLRELRTRIESVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYSINEQLQTEDVDVPLTKIRPVKKVALVVCTGDRGLCGGFNNFILKKAEARIKELKELGLEYTIISVGKKGNSYFIRRPYIPVDRFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDINGNCVDAAEDELFRLTTKEGKLTVERDTFRTKTAEFSPILQFEQDPVQILDTLLPLYLNSQVLRALQESLASELAARMSAMSNASDNASDLKKNLSTVYNRQRQAKITGEILEIVAGANALE* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2659 350 CDD F1-ATPase_gamma 30 346 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lja1g2659 350 PANTHER ATP SYNTHASE GAMMA CHAIN 16 349 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lja1g2659 350 PANTHER ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC 16 349 - -
Lja1g2659 350 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 29 349 IPR035968 GO:0015986|GO:0045261|GO:0046933
Lja1g2659 350 Pfam ATP synthase 30 349 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lja1g2659 350 PRINTS ATP synthase gamma subunit signature 327 348 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lja1g2659 350 PRINTS ATP synthase gamma subunit signature 101 120 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lja1g2659 350 PRINTS ATP synthase gamma subunit signature 296 315 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lja1g2659 350 PRINTS ATP synthase gamma subunit signature 194 211 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lja1g2659 350 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 29 349 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lja1g2659 350 Gene3D ATP synthase, gamma subunit, helix hairpin domain 244 349 - -
Lja1g2659 350 Gene3D ATP synthase, gamma subunit, helix hairpin domain 28 96 - -
Lja1g2659 350 Gene3D - 97 220 - -
Lja1g2659 350 Hamap ATP synthase gamma chain [atpG]. 27 349 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lja1g2659 350 ProSitePatterns ATP synthase gamma subunit signature. 335 348 IPR023632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2659 Lja-Chr1 31255610 31257301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2659 18 349 Primary Pumps ATPases AT1G15700 70.796 6.88e-176 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2659 K02115 - gmx:100037480 573.933