Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2657 ATGGCCAAAAATGCTGAGGGATGTGCCATAGGAATCGACCTTGGCACCACATACTCGTGTGTTGCAGTTTGGCAGGAGCAACAAGGCAGGGTAGAGATCATTCACAATGATCAAGGAAACAGAATTACTCCCTCCTTTGTTGCTTTCACTGATCAACATAGGTTGATTGGTGATGCTGCTAAGAATCAGGCTGCTATCAACCCTGAGAACACTATCTTTGATGCTAAGAGGTTAATTGGTAGGAAGTATAGTGATCCCATCGTTAAAAATGATATATTGTTATGGCCATTCAAGGTTATTGCGGGTGTTGATGACAAACCCGTGATTGTTGTTAAGTATAAGGGTCAAGAGAAGCATCTTTCTGCTGAGGAAATATCATCCATGATACTCACAAAAATGCGGGAGATTGCAGAGGCGTATCTGGAGTCACCTGTTAAGAATGCAGTTATTACTGTGCCCGCTTATTTCAATGACTCTCAGCGCAAAGCCACTGTAGATGCTGGTGTCATTGCTGGTCTCAATGTTAAGCGGATAATCAATGAACCCACTGCGGCTGCAATTGCTTATGGTCTTGACAAAAAAACTAATTGTGTGGGAGAGCGAAATATTTTCATCTTTGATCTTGGTGGTGGAACTTTTGATGTGTCTCTCGTTACAATTAAAGAAAAGGTCTTTACAGTTAAAGCCAGTGCTGGTAATTCTCACCTAGGAGGGGAGGACATTGATAACAGAATGGTGAACCACTTTGTGGAGGAGTTTAACAGGAAGAGCAAATTGGATATTAGTGGTAATGCAAAATCACTGAGAAGGTTGAGAAGTGCATGTGAAAGGGCTAAAAGGACACTGTCATCAATGGTTGTAACCACCATCGAGGTAGATGCTTTGTTTCAGGGCATTGATTTCTCTTCATCAATCGCTCGTGCAAAATGTGAGGAAATCTGCATGGACCTCTTTGAAGACTGTATGAAAACAGTGGATAGGTGTCTTGTTGATGCTAAGATGGACAAGAGCAGTGTGCATGATGTTGTCCTTGTTGGTGGATCTTCTAGGATTCCCAAAGTGCAGGAGTTATTGGAGGAATATTTCAAGGGGAAGAATCTGTGCAAGAGTATCAATCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTCCAGGCTGCTTCGTTGAGCGAAGGCATTAAGAATGTTCCTGACTTGGTGCTCTTTGATGTTACCCCGCTGTCTCTTGGTATTTTGACAACAGGAGATATCATGAGTGTGGTGATTCCAAGGAATACTACTATTCCTGTAAAGAAGACACAGGGTTACTTGACAAGTATAGATAACCAATCCAGTGTCCTGATTCAGGTTTATGAGGGTGAGAGAGCTGCAGTAAGAGATAACAATTTGTTGGGTTCGTTTAGTCTCTCTGGCTTTCCTCTTGCTCCTCGTGGTCACCGATTTGATGAAAAAACCACTGGCAATATGAATGAGATCACCATAACCAATGACAAAGGAAGACTGTCAGCAGAAGAAATTAAAAGATTAATTCAAGAAGCTGAGTATTACCAAGCTGAAGATCAGAAGTTCCTCAAGAAGGCCAAAGCAATGAATGCTTTGGTTGAATACACTTACAAAGTGAAGAAAGCTATGAAGGATACTACTGTAAGTTCTAAAATCTTACCAATGGATGAGCAGAAAGTTAGAGACGCAATTACAGAAGCTGAAAATTTGCTTGCTGACAACCAACAACTAGAAGCCTATGTGTTCGAGAACTGTTTGAACAAGGTGAGAAGCATCTTTGAACCAGTTGTAGTTAACAGGAAGCGTGCAAGAAATGATGAGGGATACGCCATAGGAATCGACCTTGGCACCACCTACTCGTGTGTTGCAGTTTGGCAAGAGCAATATGACAGAGTAGAGATCATTCACAATGATCAAGGCAACAGAACTACTCCTTCCTTTGTTGCTTTCACAGATGATCAAAGATTGATTGGTGATGCTGCAAAGAATCAGGCAGCAAGAAATCCTGAGAACACTGTCTTTGATGCTAAGAGGTTGATTGGTAGGAAGTATAGTGATCCCGTTACAAAAAATGATATCATGTTATGGCCATTCAAGGTTATTGCGGGTGTTGATGACAAACCCATGATTGTTGTTAAGTATAAGGGTAAGGAGAAGCATCTTTTTGCTGAGGAAATATCATCCATGGTTCTCACAAAGATGCGGGAGATTGCTGAGGCATATCTAGAGTCACCAGTTAAGAATGCAGTTATCACTGTGCCGGCTTATTTCAATGACTCTCAGCGGAAAGCCACCATAGATGCTGGCACCATTGCTGGTCTCAATGTTATGCGGATAATCAATGAACCCACTGCTGCAGCTATTGCGTATGGCCTTGACAAGAGAACTAATTGTGTGGGGGAGAGAAATATATTCATATTTGACCTTGGTGGTGGTACTTTTGATGTGTCTCTCCTTACAATTAAAGGTAAGGTCTTCACTGTTAAAGCCACAGCTGGAAATACTCACCTTGGAGGAGAGGACATTGATAACAGAATGGTGAACCACTTTGTAGAGGAGTTCAAAAGGAAGACCAAATTGGATATCAGTGGAAATCCTAAAGCCTTAAGGAGGTTGAGAACTGCTTGCGAGAGGGCCAAAAGAACACTCTCATGGTCTTCATTTACCACAATTGAGGTAGACTCTTTGTTTCAGGGCATTGATTTCTGTTCATCAATCACACGTGCAAAATTTGAGGAAATCAACATGGACCTCTTTGTAGAGTGTATGGAGACAGTGAATAAGTGTCTTCTTGATGCGAAGATGGACAAGAGTAGTGTAGATGATGTTGTCCTTGTTGGTGGTTCTTCAAGGATTCCCAAATTGCAGGAGCTATTGGAAGAATTTTTCAAGGGTAAGGATCTGTGCAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTCCAGGCCGCTCTGTTGAGCGAAGGCACTAAGAATGTTCCGAAATTGGTATTATTGGATGTCACACCTCTGTCTTTAGGGTGGGGGATAATAAGAGATCAAATGAGTGTAGTGATTCCTAGGAATACTACTATTCCTATAAAGATGACAAAGGATTATGTAACAATTCATGATAACCAATCCTCTGTTTTGATTAAGGTTTATGAGGGTGAGAGATCAAGAGCCAGTGATAACAATTTGTTAGGCTCTTTTAGTCTTTGTGGCCTCCCTCCAGCTCCTCGTGGCCATCCTTTTGATGAAAAAACCACTGGTAATAAGAATGATATTACCATAACCAATGACAAAGGAAGACTGTCAACAGAAGAAATTAAGAGATTGATTGAAGAAGCCGAGTATTACCAGGCTGAAGATAAGAAGTTCTGCAGGAAGGTCAATGCAGTGAATGCTTTGGACAAATACACATACAAGATGAAGAATGCTATGAAGGATACAAATATCAGTTCTAGAATTTTACCAACGGATGAGCAGAAAGTTAATGCTGCAATTATAGAAGCTGAATATTTGCTTGATGACAACCAACAAGCTGAAGCTGATGTCATGGGCAAAAATGGTGAAGGATGTGCCATAGGAATCGACCTTGGCACCACCTACTCGTGTGTTGCAGTTTGGCAGGAGCAACATAGTAGAGTAGAGATCATTCACAATGATCAAGGGAACAGAATTACTCCCTCCTTTGTTGCTTTCACTGATCAACAGAGGTTGATTGGTGATGCTGCTAAGAATCAGGCTGCTACAAACCCTGAGAACACTATCTTTGATGCTAAGAGGTTAATTGGTAGGAAGTATAGTGATCCCATCATTAAAAATGATATATTGTTATGGCCATTCAAGGTTATTGCGGGTGTTGATGACAAACCCGTGATTGCTGTTAAGTTTAAGGGTCAAGAGAAGCATCTTTCTGCTGAGGAAATATCATCCATGGTTCTCACAAAGATGCGGGAGATTGCAGAGGCATATCTGGAGTCACCTGTTAAGAATGCAGTTATTACTGTGCCTGCTTATTTCAATGACTCTCAGCGCAAAGCCACTGTAGATGCTGGTGTCATTGCTGGTCTCAATGTTAAGCGGATAATCAATGAACCCACTGCGGCTGCAATTGCTTATGGTCTTGACAAAAAAACTAATCATGTGGGAGAGCGAAATATTTTCATTTTTGACCTTGGTGGTGGTACTTTTGATGTGTCTCTCGTTACAATTAAAGAAAAGGTCTTCACAGTTAAGGCCACTGATGGAAATACTCACCTTGGAGGAGAGGACATTGATAACAGAATGGTGAACCACTTTGTGGAGGAGTTTAAAATGAAGAGCAAATTGGATATTAGTGGTAATGCAAAATCACTGAGAAGGTTGAGAAGCGCATGTGAGAGGGCTAAAAGGACACTGTCATCAATGGTTGTAACCACCATCGAGGTTGATGCTTTGTTTCAGGGCATTGATTTCTGTTCCTCAATTACTCAGGCAAAATTTGAGGAAATCAACATGGAACTCTTTGAAGAGTGTATGGAGACAGTAGATAAGTGTCTTGTTGATGCTAAGATGGACAAGAGCAGTGTGCATGATGTTGTCCTTGTTGGTGGATCTTCTAGGATTCCTAAAGTGCAACAGCTATTGCAAGAGTTTTTCAATGGAAAGGATTTGTGCAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTCCAGGCTGCTTTGTTGAGTGAAGACATTAAGAATGTTCCAAACTTGGTGCTCTTTGACGTTACCCCACTGTCTCTTGATAACCAATTTAGTCAACTGATTCAGGTTTATGAGGGTGAGAGAGCAAGAGCTGGAGATAACAATTTGTTGGGCTCTTTTCTTCTTCGTGGCATACCTCCTGCTCCTCGTGGCCACCCATTTGATGTATGTTTTGCCATGGATGAAAATGGTATACTAACTGTTTCAGCTAAGGAAAGAACCACTGGCAATACAAATGAGATCACCATAACCAATGACAAAGGAAGACTGTCAGCAAAAGAAATTAAAAGATTAGTTCAAGAAGCTGAGTCTTACCAGGCTGAAGATCAGAAGTTCCTCAGGAAAGCCAATGCGATGAATGCTTTGAGTAAATACGCTTACAAGATGAAGAATGCTATGAAGGATACTAATCTCAGTTCTAAAATTTTACCAATAGATGAGCAGAAAATTAGGGCTGCAATTGTAGAAGCTGAAAATTTTCTTGATGGCAACCAACAAGCAGAAGCCTATGTGTTTGAGAATTGTCTCCACAAGGAAAATTAA 5274 0.4137 MAKNAEGCAIGIDLGTTYSCVAVWQEQQGRVEIIHNDQGNRITPSFVAFTDQHRLIGDAAKNQAAINPENTIFDAKRLIGRKYSDPIVKNDILLWPFKVIAGVDDKPVIVVKYKGQEKHLSAEEISSMILTKMREIAEAYLESPVKNAVITVPAYFNDSQRKATVDAGVIAGLNVKRIINEPTAAAIAYGLDKKTNCVGERNIFIFDLGGGTFDVSLVTIKEKVFTVKASAGNSHLGGEDIDNRMVNHFVEEFNRKSKLDISGNAKSLRRLRSACERAKRTLSSMVVTTIEVDALFQGIDFSSSIARAKCEEICMDLFEDCMKTVDRCLVDAKMDKSSVHDVVLVGGSSRIPKVQELLEEYFKGKNLCKSINPDEAVAYGAAVQAASLSEGIKNVPDLVLFDVTPLSLGILTTGDIMSVVIPRNTTIPVKKTQGYLTSIDNQSSVLIQVYEGERAAVRDNNLLGSFSLSGFPLAPRGHRFDEKTTGNMNEITITNDKGRLSAEEIKRLIQEAEYYQAEDQKFLKKAKAMNALVEYTYKVKKAMKDTTVSSKILPMDEQKVRDAITEAENLLADNQQLEAYVFENCLNKVRSIFEPVVVNRKRARNDEGYAIGIDLGTTYSCVAVWQEQYDRVEIIHNDQGNRTTPSFVAFTDDQRLIGDAAKNQAARNPENTVFDAKRLIGRKYSDPVTKNDIMLWPFKVIAGVDDKPMIVVKYKGKEKHLFAEEISSMVLTKMREIAEAYLESPVKNAVITVPAYFNDSQRKATIDAGTIAGLNVMRIINEPTAAAIAYGLDKRTNCVGERNIFIFDLGGGTFDVSLLTIKGKVFTVKATAGNTHLGGEDIDNRMVNHFVEEFKRKTKLDISGNPKALRRLRTACERAKRTLSWSSFTTIEVDSLFQGIDFCSSITRAKFEEINMDLFVECMETVNKCLLDAKMDKSSVDDVVLVGGSSRIPKLQELLEEFFKGKDLCKSINPDEAVAYGAAVQAALLSEGTKNVPKLVLLDVTPLSLGWGIIRDQMSVVIPRNTTIPIKMTKDYVTIHDNQSSVLIKVYEGERSRASDNNLLGSFSLCGLPPAPRGHPFDEKTTGNKNDITITNDKGRLSTEEIKRLIEEAEYYQAEDKKFCRKVNAVNALDKYTYKMKNAMKDTNISSRILPTDEQKVNAAIIEAEYLLDDNQQAEADVMGKNGEGCAIGIDLGTTYSCVAVWQEQHSRVEIIHNDQGNRITPSFVAFTDQQRLIGDAAKNQAATNPENTIFDAKRLIGRKYSDPIIKNDILLWPFKVIAGVDDKPVIAVKFKGQEKHLSAEEISSMVLTKMREIAEAYLESPVKNAVITVPAYFNDSQRKATVDAGVIAGLNVKRIINEPTAAAIAYGLDKKTNHVGERNIFIFDLGGGTFDVSLVTIKEKVFTVKATDGNTHLGGEDIDNRMVNHFVEEFKMKSKLDISGNAKSLRRLRSACERAKRTLSSMVVTTIEVDALFQGIDFCSSITQAKFEEINMELFEECMETVDKCLVDAKMDKSSVHDVVLVGGSSRIPKVQQLLQEFFNGKDLCKSINPDEAVAYGAAVQAALLSEDIKNVPNLVLFDVTPLSLDNQFSQLIQVYEGERARAGDNNLLGSFLLRGIPPAPRGHPFDVCFAMDENGILTVSAKERTTGNTNEITITNDKGRLSAKEIKRLVQEAESYQAEDQKFLRKANAMNALSKYAYKMKNAMKDTNLSSKILPIDEQKIRAAIVEAENFLDGNQQAEAYVFENCLHKEN* 1758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2657 1757 Gene3D - 73 128 - -
Lja1g2657 1757 Gene3D - 1255 1310 - -
Lja1g2657 1757 Gene3D - 674 729 - -
Lja1g2657 1757 Gene3D - 1192 1568 - -
Lja1g2657 1757 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Lja1g2657 1757 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1585 1696 IPR029047 -
Lja1g2657 1757 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 993 1130 IPR029047 -
Lja1g2657 1757 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 393 529 IPR029047 -
Lja1g2657 1757 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 1695 1750 IPR029048 -
Lja1g2657 1757 Gene3D Actin; Chain A, domain 4 838 921 - -
Lja1g2657 1757 Gene3D Actin; Chain A, domain 4 1419 1502 - -
Lja1g2657 1757 Gene3D Actin; Chain A, domain 4 237 320 - -
Lja1g2657 1757 PANTHER HEAT SHOCK 70 KDA PROTEIN 1186 1593 - -
Lja1g2657 1757 PANTHER HEAT SHOCK 70 KDA PROTEIN 1591 1754 - -
Lja1g2657 1757 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 599 - -
Lja1g2657 1757 PANTHER HEAT SHOCK PROTEIN 70KDA 605 1183 IPR013126 GO:0005524|GO:0140662
Lja1g2657 1757 CDD HSPA1-2_6-8-like_NBD 610 990 - -
Lja1g2657 1757 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 528 601 IPR029048 -
Lja1g2657 1757 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Lja1g2657 1757 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 995 1134 IPR029047 -
Lja1g2657 1757 ProSitePatterns Heat shock hsp70 proteins family signature 3. 1524 1538 IPR018181 -
Lja1g2657 1757 Gene3D - 1697 1756 IPR029048 -
Lja1g2657 1757 Gene3D - 1131 1186 IPR029048 -
Lja1g2657 1757 Gene3D - 530 600 IPR029048 -
Lja1g2657 1757 PRINTS 70kDa heat shock protein signature 211 221 - -
Lja1g2657 1757 PRINTS 70kDa heat shock protein signature 339 355 - -
Lja1g2657 1757 PRINTS 70kDa heat shock protein signature 38 50 - -
Lja1g2657 1757 PRINTS 70kDa heat shock protein signature 148 168 - -
Lja1g2657 1757 PRINTS 70kDa heat shock protein signature 397 416 - -
Lja1g2657 1757 PRINTS 70kDa heat shock protein signature 8 21 - -
Lja1g2657 1757 PRINTS 70kDa heat shock protein signature 60 68 - -
Lja1g2657 1757 PRINTS 70kDa heat shock protein signature 371 391 - -
Lja1g2657 1757 ProSitePatterns Heat shock hsp70 proteins family signature 2. 1387 1400 IPR018181 -
Lja1g2657 1757 ProSitePatterns Heat shock hsp70 proteins family signature 1. 1194 1201 IPR018181 -
Lja1g2657 1757 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1576 1698 IPR029047 -
Lja1g2657 1757 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 531 IPR029047 -
Lja1g2657 1757 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Lja1g2657 1757 SUPERFAMILY Actin-like ATPase domain 1382 1571 IPR043129 -
Lja1g2657 1757 Coils Coil 560 580 - -
Lja1g2657 1757 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Lja1g2657 1757 Gene3D - 194 368 - -
Lja1g2657 1757 SUPERFAMILY Actin-like ATPase domain 200 389 IPR043129 -
Lja1g2657 1757 Gene3D - 795 969 - -
Lja1g2657 1757 PANTHER HEAT SHOCK 70 KDA PROTEIN 605 1183 - -
Lja1g2657 1757 PANTHER HEAT SHOCK PROTEIN 70KDA 1186 1593 IPR013126 GO:0005524|GO:0140662
Lja1g2657 1757 PANTHER HEAT SHOCK PROTEIN 70KDA 1591 1754 IPR013126 GO:0005524|GO:0140662
Lja1g2657 1757 PANTHER HEAT SHOCK PROTEIN 70KDA 4 599 IPR013126 GO:0005524|GO:0140662
Lja1g2657 1757 SUPERFAMILY Actin-like ATPase domain 1190 1375 IPR043129 -
Lja1g2657 1757 ProSitePatterns Heat shock hsp70 proteins family signature 3. 943 957 IPR018181 -
Lja1g2657 1757 Gene3D - 611 987 - -
Lja1g2657 1757 Gene3D - 1376 1550 - -
Lja1g2657 1757 SUPERFAMILY Actin-like ATPase domain 801 990 IPR043129 -
Lja1g2657 1757 ProSitePatterns Heat shock hsp70 proteins family signature 2. 806 819 IPR018181 -
Lja1g2657 1757 Pfam Hsp70 protein 1191 1590 IPR013126 GO:0005524|GO:0140662
Lja1g2657 1757 Pfam Hsp70 protein 9 578 IPR013126 GO:0005524|GO:0140662
Lja1g2657 1757 Pfam Hsp70 protein 1591 1745 IPR013126 GO:0005524|GO:0140662
Lja1g2657 1757 Pfam Hsp70 protein 610 1178 IPR013126 GO:0005524|GO:0140662
Lja1g2657 1757 ProSitePatterns Heat shock hsp70 proteins family signature 1. 613 620 IPR018181 -
Lja1g2657 1757 Gene3D - 10 386 - -
Lja1g2657 1757 SUPERFAMILY Actin-like ATPase domain 609 794 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2657 Lja-Chr1 31204675 31243179 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2657 1 614 Calmodulin-binding Proteins AT3G12580 65.087 0.0 821
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2657 K03283 - pcla:123762431 1285.4