Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2654 ATGGGCAAAACTGATGAGGGATGTGCTATAGGAATCGACCTTGGCACCACTTATTCTTGTGTTGCAGTTTGGCAGGAGGAACATAGCAGAGTAGAGATCATTCACAATGACCAAGGAAACAGAACTACTCCCTCCTTTGTTGCTTTCACAGATGAACAAAGATTGACTGGTGAAGCTGCAAAGAATCAGGCTGCTACAAACCCTGAGAACACTGTCTTTGATGCTAAGAGGTTAATTGGAAGGAAGTATAGTGAGCCCATTATCAAAAATGATATGATGTTATGGCCATTCAAGGTTATTGCGGGTGACAATGACAAACCCATGATTGTAGTCAAGTATCATGGTAAGGAGAAGCATCTTTTTGTTGAGGAAATATCATCCATGGTTCTCACAAAGATGCGAGAGATTGCAGAGGCATATCTGGAGTCACCTGTTAAGAATGCAGTAATCACTGTGCCGGCCTATTTCAATGACTCTCAGCGTAAAGCCACTATAGATGCTGGTGTTATTGCTGGCCTCAATGTTATGAGGATAATCAATGAACCCACAGCTGCAGCTATTGCATATGGACTTGACAAGAGAACTAATTGTAAGAAAAAGCGAAATATTTTCATCTTTGACCTTGGAGGTGGTACTTTTGATGTGTCTCTCCTTACAATTAAAGGGAAGGAATTCAAAGTCCAAGCCACAGCAGGAAATACTCACTTAGGAGGAGAGGACTTTGATAACAGAATGGCGAAATACTTTGTAGAAGAGTTTAGAAGGAAGAGCAAATTGGATATCAGTGAAAATCCTAAAGCCCTAAGAAGGTTGAGAAGTGCTTGCGAGAGGGCGAAAAGGACACTCTCATGGACTACATGTACCACAGTTGAGGTAGATTGTTTGTTTCAGGGCATTGATTTTTGTTCATCAATAACTCGTTCAAGGTTTGAGGAACTTAACATGGACCTCTTTGAAGAGTGTATGGAGACAGTGGATAGGTGCCTCAATGATGCTAAGATTGACAAGTGCAAAGTGCATGATGTTGTCCTTGTTGGTGGATCTTCTAGGATTCCGAAAGTGAAGGAGTTATTGGATGATTTTTTCAAGGGGAAGAGTCTGTGCAAGAGTATCAATCCTGACGAGGCCGTTGCTTACGGTGCAGCTGTCCAGGCTGCTTTGTTGAGCAAAGGTATTAAGAATGTTCCTGACTTGGTGCTCTATGATGTTACACCGCTGTCTCTTGGTATTTGTATAAAAGGAGATATCATGAGTGTGGTGATTCCAAGGAATACTACTATTCCTGTAAAGAAGACATACTGTTACACGACAAGTGCAGATAACCAATCCAGTGTTCTGATTGAGGTTTATGAGGGCGAGAGAGCTAGAGCAAGTGATAACAATTTGCTCGGTTCCTTTGATCTTTTTGGCCTCCCTCCTGCTCCTCGTGGCCATCCTTTTGATGTATGCTTTGCTATAGATGAAAATGGTATTCTATGTGTTTCCGCTAAGGAAAAAACCACTGGCAGTAAGAATGAAATCACCATAACCAATGATAAAGGTAGGCTATCGGCCCATGAAATTAAAAAGTTTATTCAAGAAGCTGAGAGTTTCCGGGCTGAAGACAAGAAATTCCTTAGAAAGGCCAATGCAATGAATTCTTTGAATGATTACATCTACAAGATGAAGAAAGCTTTGAAGAATGATTATATTAATTCAAAGCTTAGCTCAGAAGAAAAGGAGAAGATCAGTTCCGCAATCACAAAGGCTACAAGTTTGCTAGATGGTGGTAATAATAAGCCAGATTCTGCCCTGGTTTTTCTATTCTTGCCAAACCTCAACAACGTTTCTTGTGTTAGATTGAAAGAAAGCATGGCCAAAAATGGTGAGGGATGTGCCATAGGAATTGACCTAGGCACCACTTACTCGTGTGTTGCAGTTTGGTTGGAGCAACATGGCAGAGTAGAGATCATTCACAATGACCAAGGAAACAAAATTACTCCCTCCTTTGTTGCTTTCACAGATGATCAAAGATTGATTGGTGATGCTGCTAAGAATCAGGCTGCAACAAACCCTGAAAACACTGTCTTTGATGCTAAGAGGTTAATTGGTAGGAAGTATAGTGATCCCATTATCAAAAATGATATGATGTTATGGCCATTCAAGGTTATTGCGGGTGTTGATGACAAATCCATGATTGTTGTTAAGTATCACGGTAAGGAGAAGCATCTTTTTGCTGAGGAAATATCATCCATGGTTCTCACGAAGATGCAAGAAATTGCTGAGGCATATTTGGAGTCACCTGTTAAGAATGCAGTTATAACTGTACCTGCTTACTTTAACGACTCTCAGCGCAAGGCCACAATAGATGCTGGTGCCATTGCTGGCCTCAATGTTATGCGTATAATCAATGAGCCCACAGCTGCCGCTATTGCATATGGCCTTGACAAGAGAGCTAATTGTAAGAAACAGAGAAATATATTCATCTTTGACCTTGGTGGTGGTACTTTTGATGTGTCTCTCCTTACAATTAAAGGAAATGAATTCAAAGTTAAAGCCACTGCTGGAAACACACACCTAGGAGGAGAGGACTTTAATAACAGAATGGTGGAATACTTTGTAGAAGAGTTCAGAAGGAAGAGCGAATTGGATATTAGTGGAAATCCTAAAGCCCTGAGGAGGTTGAGAAGTGTTTGCGAGAGAGCCAAAAGGACACTCTCATGGACTACATGTACCACAATTGAGGTGGATTCTTTATTTCAGGGCATTGATTTCTGTTCCTCAATCACTCGTGCAAAGTTTGAGGAACTTAACATGAACATGTTTAGAGAATGTATAGAGACAGTGGATAGGTGCCTCAGTGATGCCAAGATGGACAAGAGTAGTGTACATGATGTTGTCCTTGTTGGTGGATCTTCTAGGATTCCAAAACTGCAGGAGTTATTGCAGGACTTTTTCAAGGGGAGGGATCTGTGCAAGAGCATCAACCCTGATGAGGCTGTTGCATATGGTGCTGCTGTCCAGGCTGCTTTACTGAGTGAAGGCATTAAGAATGTTCCAAACTTTGTGCTGTTTGATGTTACACCATTGTCTCTTGGTATATCAGTAAAAGGAGATATTATGAATGTGGTGATTCCTAGGAATACTACCATTCCTGTAAAGAAGACGATGGGTTACCATACACGTGTAGATAACCAATCCAGAACCTGGCGGAGTCAGGTTTCTGAGGGCTACAGAGCTAAAACCCGGATTCAGGTTTATGAGGGTGAGAGAGCAAGAGCAAGTGATAACAATTTGTTGGGTTCTTTTCATCTTTCTGGCTTAGCTCCTGCTACTCGCGGCCATATATTGGATGTAACGTTCGCTATAGATGAAAATGGTAGACTAACTGTTTCTGCTAAAGAAAGAACAACAGACAATGAGAATGAGATCACCATAACCAATGACAGAGAAAGGTTGAGGACTGAAGAAATTAAAAGACTGATTGAAGAAGCTGAGAGTTTTCAGGCCGAAGATAAAAAATTCCTTAAGAAGGCCAATGCAATGAATGCTTTGGATAACTACATTTACAAGATGAGGAACGCTTTGAAGAGTTGCTCAGAAGAAAATGAGAAGATTAGTTCTGCAATTACAAAGGCCACAAATTTGCTTGATGGTGGTAATAATCAGCTACATGAAACAGAGGGATGTGCCATAGGAATTGACCTAGGCACCACTTACTCGTGTGTTGCTGTTTGGAAGGAGACCGAAGACAGAATAGAGATTATTCAGAATGAACAAGGCAACAAAATTACTCCCTCCTTTGTTGCTTTCACTGATGATCAAAGGTTGATTGGTGATGCAGCTAAGAATCAGGCTGCTACAAACCCTGAGAACACTGTCTTTGATGCTAAGAGGTTGATAGGTAGGAAGCATAGTGATCCCATTATAAAAAATGATATGATGTTATGGCCATTCAAGGTTATTGCGGGTGTTGATGACAAGCCCATGATTGTCGTCAAGTATCATGGTAAGGAGAAGCATCTTTTTGTTGAGGAAATATCATCCATGGTTCTCACAAAGATGCGAGAGATTGCAGAGGCATATCTGGAGTCACCTGTTAAGAATGCAGTTATCACCGTGCCGGCTTATTTTAATGACTCTCAGCGCAAAGCCACCATAGATGCTGGCACCATTGCAGGTCTAAATGTTATGCGGATAATCAATGAACCCACAGCTGCAGCTATTGCATATGGCCTGGAAAAGAGAACTAATTGTAAGGACTTCAAAGTTCAAGCTACTGCTGGAAATACTCACCTAGGAGGAGAGGACTTTGATAACAGAATGGTGGAATACTTTGTAGAGGAGTTCAAAAGGAAGAGCAAATTGGATATTGCTGGAAATTCTAAAGCCCTGAGGAGGTTGAGAAGTGCTTGCGAGAGGGCAAAAAGGACACTCTCATGGACTACATGTACCACAGTGGAGGTAGATTCTTTATTTCAAGGCATTGATTTCTGTTTCTCAATCACTCGTGCAAGGTTTGAGGAACTTAACATGAACATGTTTAGAGAATGTATAGAAACAGTGGATAAGTGCCTCAACGATGCTAAGATGGACAAGAGTAGTGTACATGATGTTGTCCTTGAGTTATTGCAGGATTTTTTCAAGGGGAAGGATCTGTGCAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCTGCTGTTCAGGCTGCTTTGCTGAGTGGAGGCATAAAGAACGTTCCAAACTTGGTGTTGTCGGATGTTACACCGCTGTCTCTTGGTATATTAGTCCAAGTAGATATCATGAGTGTAGTGATTCCTAGGAATACTACTACTCCTGTAAAGAAGACAGAGGGTTACACAACAGATAGAGATAACCTATCCCGTGTCTTGATTGAGGTTTATGAGGGTGAGAGAGCAAGAGCCAGTGATAACAGTTTGCTGGGTTCCTTTGTTCTTTCGGGCATTCCTCCTACTCCTCGTGGCCATCCTCTTGATGTATGCTTTGCTATTGATGAAAATGGCATTTTATCTGTTTCCGCTAAGGAAAAAACCAATGGCAGTAAGAATGAGATCACCATAACCAATGACAAAGGGAGGCTCTCGACTGAAGAAATTAAAAGATTGATACAAGAAGCTCAGAGATTCCAGGCTGAAGACAAGAAATTCCTTAGGAAGGCCAATGCAATGAATTCTTTGGATGATTACATTTACAAGATGAAGAAATCTTTGAAGAATGATTATATTAATTCAAAGCTTAGCTCAGAAGAAAAGGAGAAGATCAGTTCCGCAATCACAAAGGCCACAAATTTGCTTGATGCTGGTAATAATAAGCCAGTTGAAATAGAGGTGCTTGAGGATTATGTGAAGGAGCTTGAGAAGGAAATATCATCCATGGTACTCACAAAGATGTGTGAGATTGCTGAGGCATATCTGCAGTCACCTGTCAAGAATGCAGTTATTACTGAGCCGGCTTATTTCGATGACTCTCAGCGCAAAGCCACTATAGATGCAGGTGTGATTGCTGGTCTCAATGTTAAGCGGATAATCAATGAACCCACAGCTGCAGCTATTGCATATGGCTTGGACAAGACAACTAATTGTGATGAAGAGCGAAACATATTCATCTTTGATCTTGGAGGTGGTACTTTTGATGTGGTCAAATATATTTTGAAGAATCAATAA 5667 0.4119 MGKTDEGCAIGIDLGTTYSCVAVWQEEHSRVEIIHNDQGNRTTPSFVAFTDEQRLTGEAAKNQAATNPENTVFDAKRLIGRKYSEPIIKNDMMLWPFKVIAGDNDKPMIVVKYHGKEKHLFVEEISSMVLTKMREIAEAYLESPVKNAVITVPAYFNDSQRKATIDAGVIAGLNVMRIINEPTAAAIAYGLDKRTNCKKKRNIFIFDLGGGTFDVSLLTIKGKEFKVQATAGNTHLGGEDFDNRMAKYFVEEFRRKSKLDISENPKALRRLRSACERAKRTLSWTTCTTVEVDCLFQGIDFCSSITRSRFEELNMDLFEECMETVDRCLNDAKIDKCKVHDVVLVGGSSRIPKVKELLDDFFKGKSLCKSINPDEAVAYGAAVQAALLSKGIKNVPDLVLYDVTPLSLGICIKGDIMSVVIPRNTTIPVKKTYCYTTSADNQSSVLIEVYEGERARASDNNLLGSFDLFGLPPAPRGHPFDVCFAIDENGILCVSAKEKTTGSKNEITITNDKGRLSAHEIKKFIQEAESFRAEDKKFLRKANAMNSLNDYIYKMKKALKNDYINSKLSSEEKEKISSAITKATSLLDGGNNKPDSALVFLFLPNLNNVSCVRLKESMAKNGEGCAIGIDLGTTYSCVAVWLEQHGRVEIIHNDQGNKITPSFVAFTDDQRLIGDAAKNQAATNPENTVFDAKRLIGRKYSDPIIKNDMMLWPFKVIAGVDDKSMIVVKYHGKEKHLFAEEISSMVLTKMQEIAEAYLESPVKNAVITVPAYFNDSQRKATIDAGAIAGLNVMRIINEPTAAAIAYGLDKRANCKKQRNIFIFDLGGGTFDVSLLTIKGNEFKVKATAGNTHLGGEDFNNRMVEYFVEEFRRKSELDISGNPKALRRLRSVCERAKRTLSWTTCTTIEVDSLFQGIDFCSSITRAKFEELNMNMFRECIETVDRCLSDAKMDKSSVHDVVLVGGSSRIPKLQELLQDFFKGRDLCKSINPDEAVAYGAAVQAALLSEGIKNVPNFVLFDVTPLSLGISVKGDIMNVVIPRNTTIPVKKTMGYHTRVDNQSRTWRSQVSEGYRAKTRIQVYEGERARASDNNLLGSFHLSGLAPATRGHILDVTFAIDENGRLTVSAKERTTDNENEITITNDRERLRTEEIKRLIEEAESFQAEDKKFLKKANAMNALDNYIYKMRNALKSCSEENEKISSAITKATNLLDGGNNQLHETEGCAIGIDLGTTYSCVAVWKETEDRIEIIQNEQGNKITPSFVAFTDDQRLIGDAAKNQAATNPENTVFDAKRLIGRKHSDPIIKNDMMLWPFKVIAGVDDKPMIVVKYHGKEKHLFVEEISSMVLTKMREIAEAYLESPVKNAVITVPAYFNDSQRKATIDAGTIAGLNVMRIINEPTAAAIAYGLEKRTNCKDFKVQATAGNTHLGGEDFDNRMVEYFVEEFKRKSKLDIAGNSKALRRLRSACERAKRTLSWTTCTTVEVDSLFQGIDFCFSITRARFEELNMNMFRECIETVDKCLNDAKMDKSSVHDVVLELLQDFFKGKDLCKSINPDEAVAYGAAVQAALLSGGIKNVPNLVLSDVTPLSLGILVQVDIMSVVIPRNTTTPVKKTEGYTTDRDNLSRVLIEVYEGERARASDNSLLGSFVLSGIPPTPRGHPLDVCFAIDENGILSVSAKEKTNGSKNEITITNDKGRLSTEEIKRLIQEAQRFQAEDKKFLRKANAMNSLDDYIYKMKKSLKNDYINSKLSSEEKEKISSAITKATNLLDAGNNKPVEIEVLEDYVKELEKEISSMVLTKMCEIAEAYLQSPVKNAVITEPAYFDDSQRKATIDAGVIAGLNVKRIINEPTAAAIAYGLDKTTNCDEERNIFIFDLGGGTFDVVKYILKNQ* 1889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2654 1888 Gene3D - 627 1003 - -
Lja1g2654 1888 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1573 1728 IPR029047 -
Lja1g2654 1888 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 1723 1793 IPR029048 -
Lja1g2654 1888 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Lja1g2654 1888 Gene3D - 690 745 - -
Lja1g2654 1888 Gene3D - 73 128 - -
Lja1g2654 1888 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Lja1g2654 1888 PANTHER HEAT SHOCK 70 KDA PROTEIN 1414 1788 - -
Lja1g2654 1888 SUPERFAMILY Actin-like ATPase domain 1413 1567 IPR043129 -
Lja1g2654 1888 ProSitePatterns Heat shock hsp70 proteins family signature 1. 629 636 IPR018181 -
Lja1g2654 1888 Gene3D - 1776 1872 - -
Lja1g2654 1888 PANTHER HEAT SHOCK PROTEIN 70KDA 4 608 IPR013126 GO:0005524|GO:0140662
Lja1g2654 1888 PANTHER HEAT SHOCK PROTEIN 70KDA 1414 1788 IPR013126 GO:0005524|GO:0140662
Lja1g2654 1888 ProSitePatterns Heat shock hsp70 proteins family signature 2. 822 835 IPR018181 -
Lja1g2654 1888 Gene3D - 811 985 - -
Lja1g2654 1888 Gene3D - 1212 1429 - -
Lja1g2654 1888 SUPERFAMILY Actin-like ATPase domain 1223 1408 IPR043129 -
Lja1g2654 1888 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Lja1g2654 1888 Pfam Hsp70 protein 9 587 IPR013126 GO:0005524|GO:0140662
Lja1g2654 1888 Pfam Hsp70 protein 1224 1410 IPR013126 GO:0005524|GO:0140662
Lja1g2654 1888 Pfam Hsp70 protein 626 1204 IPR013126 GO:0005524|GO:0140662
Lja1g2654 1888 Pfam Hsp70 protein 1415 1780 IPR013126 GO:0005524|GO:0140662
Lja1g2654 1888 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 547 IPR029047 -
Lja1g2654 1888 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1568 1751 IPR029047 -
Lja1g2654 1888 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1005 1200 IPR029047 -
Lja1g2654 1888 PANTHER HEAT SHOCK PROTEIN 70KDA 1788 1881 IPR013126 GO:0005524|GO:0140662
Lja1g2654 1888 SUPERFAMILY Actin-like ATPase domain 198 389 IPR043129 -
Lja1g2654 1888 SUPERFAMILY Actin-like ATPase domain 1776 1858 IPR043129 -
Lja1g2654 1888 ProSitePatterns Heat shock hsp70 proteins family signature 1. 1227 1234 IPR018181 -
Lja1g2654 1888 PANTHER HEAT SHOCK 70 KDA PROTEIN 1788 1881 - -
Lja1g2654 1888 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 393 545 IPR029047 -
Lja1g2654 1888 SUPERFAMILY Actin-like ATPase domain 815 1006 IPR043129 -
Lja1g2654 1888 Gene3D - 546 597 IPR029048 -
Lja1g2654 1888 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Lja1g2654 1888 Gene3D - 10 386 - -
Lja1g2654 1888 PRINTS 70kDa heat shock protein signature 211 221 - -
Lja1g2654 1888 PRINTS 70kDa heat shock protein signature 397 416 - -
Lja1g2654 1888 PRINTS 70kDa heat shock protein signature 371 391 - -
Lja1g2654 1888 PRINTS 70kDa heat shock protein signature 8 21 - -
Lja1g2654 1888 PRINTS 70kDa heat shock protein signature 60 68 - -
Lja1g2654 1888 PRINTS 70kDa heat shock protein signature 339 355 - -
Lja1g2654 1888 PRINTS 70kDa heat shock protein signature 148 168 - -
Lja1g2654 1888 PRINTS 70kDa heat shock protein signature 477 493 - -
Lja1g2654 1888 PRINTS 70kDa heat shock protein signature 38 50 - -
Lja1g2654 1888 Gene3D Actin; Chain A, domain 4 237 320 - -
Lja1g2654 1888 Gene3D Actin; Chain A, domain 4 854 937 - -
Lja1g2654 1888 Gene3D - 194 368 - -
Lja1g2654 1888 ProSitePatterns Heat shock hsp70 proteins family signature 3. 959 973 IPR018181 -
Lja1g2654 1888 PANTHER HEAT SHOCK 70 KDA PROTEIN 1219 1413 - -
Lja1g2654 1888 PANTHER HEAT SHOCK PROTEIN 70KDA 1219 1413 IPR013126 GO:0005524|GO:0140662
Lja1g2654 1888 PANTHER HEAT SHOCK 70 KDA PROTEIN 621 1216 - -
Lja1g2654 1888 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 608 - -
Lja1g2654 1888 SUPERFAMILY Actin-like ATPase domain 625 810 IPR043129 -
Lja1g2654 1888 Gene3D Actin; Chain A, domain 4 1430 1510 - -
Lja1g2654 1888 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 544 591 IPR029048 -
Lja1g2654 1888 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1011 1179 IPR029047 -
Lja1g2654 1888 PANTHER HEAT SHOCK PROTEIN 70KDA 621 1216 IPR013126 GO:0005524|GO:0140662
Lja1g2654 1888 Coils Coil 1776 1796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2654 Lja-Chr1 31140623 31168608 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2654 1 589 Calmodulin-binding Proteins AT3G12580 68.359 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2654 K03283 - hbr:110636145 2010.34