Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2641 ATGGTTGACCTTTGGATCCCTACACGAGCTCTTACGTTGAAAGTTATCGGAATTTGGTGGCACTTTATTGGAAGAGGGTATCCTATCTTTCTGTACCGAACCCTCAAAAATGATGTTGACAAGTGCGAGAAGTCTCAAACCCTAGCTCTTCTGCAGATTCGCCGCTTCTCTTTCGCCTGGGATCTACTTCTCAGTATTGTACTCGCTAAGATGGAATCTAACAAATACCAGGCAGTTGAATCGGGGAACTATAGCCCAGTCTATGGTATCAAAATTTTGGTTGTGGATCCTCACCCAATGCGTCTTCAAATTGTATCAAGCATACTCTGTTCCCTTGGACATGAAGTTCTGGCTGCTACTCATACTTCTGATGTATTACCCATTCTTGAGGGCACGAGGAATACGATTAACCTTGTACTTGTAGAGGCTCACTTGCCTAGCATGGAAATATATGAGCTCTCACAAAGGATAGATAGATCTTATCCTATATGTCTATTTCTGACTGCTAATGATGCTCAGCTTTTGGCTTCTCACACAAGAGCGCTTCGTAAGGAAGCTAGTGTGTCTCAACTTATTGGAGATCAGGTTTCTGATCTAAGGGGCCTGTGGAGATTCTCATTGTGTGATGGACCGTGCTGTGGGGGAGACAAAGTCCTGAAATTGAACAGGTATACCTGGACTGATGATATACGAAACATTTTCTTGGAAGCTATTGAATCATCAGCACTCAGTGCTCCTCCCAATGTGCCACAGCTTAGAGAGGATATGGCTTCAAGCTATTATCAGCAAGCTGGTGATGAAACTCTGCCGAACTGGAATGGATGTTCATGCTCTTCAAATTCGAGATCACACCAACTATGCCCTCTGTTCTTAAACGAGCCAGGTGTGCCCAACAAACAGAAGTTTCTCTGTAATTGCATGTCTCAGGAGCAAAATCAGAGGCGTCTGCTGCGTAATAATCTGCAAGGTGTTGCTGCACACACCACATCTGACTTTGGTGCATTCATGAACAATGGTAATGGGGATGCATCACAAGACATCACTGGAGTTGGAGATAACATTGATGGAAAAACTCTCGAAGAGGATTCATTTCTCTTCTTAGAGGATTTATTCGTTACCCCAGAATTTCCTTCATCAGATGAAAATGCAGATGTCATTTTTTGGCCAGAAGCTGAAATGGTTAGTGAAAATCCTCCTACTTCAGAAGGAAATGTGGAGTTCAATGATGAGGACCTGGAAAAGTGGATACAGGAGTTAGCTGAAGGGGATTATGTAATGGAATTAAGGCTGTGA 1293 0.4323 MVDLWIPTRALTLKVIGIWWHFIGRGYPIFLYRTLKNDVDKCEKSQTLALLQIRRFSFAWDLLLSIVLAKMESNKYQAVESGNYSPVYGIKILVVDPHPMRLQIVSSILCSLGHEVLAATHTSDVLPILEGTRNTINLVLVEAHLPSMEIYELSQRIDRSYPICLFLTANDAQLLASHTRALRKEASVSQLIGDQVSDLRGLWRFSLCDGPCCGGDKVLKLNRYTWTDDIRNIFLEAIESSALSAPPNVPQLREDMASSYYQQAGDETLPNWNGCSCSSNSRSHQLCPLFLNEPGVPNKQKFLCNCMSQEQNQRRLLRNNLQGVAAHTTSDFGAFMNNGNGDASQDITGVGDNIDGKTLEEDSFLFLEDLFVTPEFPSSDENADVIFWPEAEMVSENPPTSEGNVEFNDEDLEKWIQELAEGDYVMELRL* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2641 430 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR8-RELATED 89 208 - -
Lja1g2641 430 PANTHER TWO-COMPONENT RESPONSE REGULATOR 89 208 IPR045279 GO:0009736
Lja1g2641 430 SUPERFAMILY CheY-like 88 174 IPR011006 -
Lja1g2641 430 ProSiteProfiles Response regulatory domain profile. 91 199 IPR001789 GO:0000160
Lja1g2641 430 Gene3D - 87 192 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lja1g2641 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2641 - - lja:Lj1g3v3150020.1 718.768