Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2633 ATGGCGACCACTACAGCAAGGTCTTTTCTCCAAGTGGCGGCAACGGAGGAGGTTGCACCGCCTCTCAGAGTTGTTCAGATGGAAGGATTGGTTATCCTGAAGATAATTAAGCATTGTAAGGACCACTCACCTTCTTTAGTCACTGGACAACTTCTTGGGCTGGATGTTGGCAGTGTTCTTGAAGTTACCAACTGCTTCCCCTTTCCAATGAGGGAGGAGGATGAGGAAATTGAAGCTGATGGTGCTAATTACCAGCTTGAAATGATGAGGTGCCTGAGGGAGGTTAATGTTGACAATAATACAGTTGGATGGTATCAGTCTACACTGCTTGGGTCCTTTCAGACCGTGGAGCTGATTGAAACCTTTATGAATTACCAGGAGAATATTAGACGCTGTGTTTGCATTGTATATGATCCATCAAGGTCTGATCAAGGTGTCCTAGCCCTGAAGGCCTTGAAGCTTTCTGATTCATTCATGGAACTGTATCGCAGCAATAATTTTACTGGAGAAAAGTTGAGGGAAAAGAATTTATCATGGGTGGATATCTTCGAGGAAATACCTATCAAAGTTTCAAATTCTGCTCTCATCAGTGCTTTTATGACAGAGCTGGAACCTGATACTCCAGTCACGCAGTGTGATTATGATCGGCTGCAACTGTCAACCAGTTCACTATTGGAGAGAAATACAGAATATTTGATCGAGTGCATGGATGACTTGTCACTAGAACAACAAAAGTTCCAATTCCACTATCGGAGTCTGTCTCGTCAGCAAGCTCAGCAGCAAGCATGGCTTCAAAAGAGAAGGACAGAGAACATGGCACGCAAAGCTGCTGGGGAGGAGCCTTTGCCTGAAGAAGATCCTTCAAACCCCATCTTCAAGCCACTCCCCGAGCCATCACGGTTGGAGAGTTTCCTCATTACAAACCAAATTTCTAACTACTGCAACCAAATTAACGGGGTCTCGGGACAAAGCTTTAACAGACTTTATTTGATGAAGGCTTTGCATGAGGATTGA 1014 0.4448 MATTTARSFLQVAATEEVAPPLRVVQMEGLVILKIIKHCKDHSPSLVTGQLLGLDVGSVLEVTNCFPFPMREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIETFMNYQENIRRCVCIVYDPSRSDQGVLALKALKLSDSFMELYRSNNFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEPDTPVTQCDYDRLQLSTSSLLERNTEYLIECMDDLSLEQQKFQFHYRSLSRQQAQQQAWLQKRRTENMARKAAGEEPLPEEDPSNPIFKPLPEPSRLESFLITNQISNYCNQINGVSGQSFNRLYLMKALHED* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2633 337 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 3 336 - -
Lja1g2633 337 Gene3D Cytidine Deaminase, domain 2 2 214 - -
Lja1g2633 337 ProSiteProfiles MPN domain profile. 25 158 IPR037518 -
Lja1g2633 337 MobiDBLite consensus disorder prediction 268 282 - -
Lja1g2633 337 CDD MPN_eIF3h 23 286 IPR027524 GO:0003743|GO:0005737|GO:0005852
Lja1g2633 337 Pfam C-terminal region of eIF3h 144 336 IPR045810 -
Lja1g2633 337 MobiDBLite consensus disorder prediction 265 294 - -
Lja1g2633 337 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 23 126 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lja1g2633 337 SMART pad1_6 24 157 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lja1g2633 337 Hamap Eukaryotic translation initiation factor 3 subunit H [EIF3H]. 20 337 IPR027524 GO:0003743|GO:0005737|GO:0005852
Lja1g2633 337 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT H 3 336 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2633 88 337 Eukaryotic Initiation Factors Gene Family AT1G10840 84.000 9.60e-158 440