Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2632 ATGGCCATGAAAGGACAGGGTATTGCTATTGGAATCGACCTCGGCACCACCTACTCCTGCGTCGGAGTGTGCAAGCAGCATGCTCGTATCGAAATCATCCCCAACGACCAGGGCAACCGGACCACCCCCTCTTACGTTGCTTTCACGGATTCCGGGCGCTTGGTCGGCGATGCCGCCAAGAACCAGGTCACCAGGAACCCCACCAACACCATCTTTGATGCGAAGCGTTTGATTGGAAGGAAATTCTCTGATGCTTCAGTTCAGACTGACATGAAGCTATGGCCATTCAAGGTCATTTCTGGTACTGTCGACAAGCCCATGATTGTTGTTAACTACAAGAGTGAGGAGAAGCAGTTCACTGCTGAGGAGATTTCCTCCATGGTCCTCATGAAGTTGCGTGCGATTGCTGAGGCTTATCTTGGTTCCACTGTGAAGAACGCTGTTGTCACTGTCCCAGCATACTTCAATGACTCTCAACGCCAGGCCACGAAGGACGCAGGTGTCATTGCGGGCCTTAATGTCATGCGTATCATCAACGAACCCACCGCTGCAGCCCTTGCCTATGGCCTTGACACGGGGGCCGACACTGTTGACTTTGACAAGGACGTGTTGATTTTTGACCTTGGTGGTGGTACTTTTGATGTCTCTGTTCTAAACATTTATAATGGTGTCTTTGATGTTAAAGCCACTGCCGGAGACACCCATCTTGGAGGTGAAGACTTTGATAACAGGATGGTTAACCATTTTGTTGAGGAGTTCAAGAGGAAGCACGAGAAGGACATTAGTGGGAATCCAAGGGCTTTAAGAAGGTTGAGGACTGCTTGTGAAAGGGCAAAGAGGACTCTCTCCTCCACAGTACAGACCACCCTTGAGATTGACTCATTGTATGAAGGCATTGACTTCTACACTGCAATCACTCGTGACAGGTTTGAAGAACTCAACATGGACCTCTTCAGGAACTGCATGGAGACTGTTGAGCGGTGTTTGAGGGACGCTGAGATGGACAAGAGCAGTGTCCATGATGTTGTTCTTGTTGGTGGGTCTACTAGGATCCCAAAAGTGCAGCAGCTGTTGCAGGATTTCTTCAACGGGAAGGAGCTCTGCAAGAGCATCAACCCCGACGAGGCTGTTGCTTGTGGAGCTGCTATTCAGGCTGCTATCTTGACCGGTGAGGACACTGAGGCAATTACAGAATTTATATTGTGTGATGTCACACCTATTTCACTTGGTGTGGAAACGGTTGGTGGTGTCATGAATGTACTCATTCAAAAGAACCAAACGATTCCATTTAAGAATGAGCGGGTTTTCTCGACCTACTCAGACAATCAGCCTGGTGTGTCTATCAAGGTGTACGAGGGTGAGAAAACCTGTAGCAGGGATAACTACTTGTTGGGTAAATTCGAGCTTTCTGGCATTCCTCCTGCTCCAAAGGGTGTTCCTCAGATCAATGTTTGCTTTCATATTGATAACAATGGTATCTTGAATGTCTCTGCTGAGGACAAGACTACAGGGAATAAGAACAAGATCACTATCACCAATCACAAGGGAAGGCTCTCTAAGGAGGAGATTGAGAAGATGGTGCAGGAGGCGGAGAAGTACTATTCTACAAAAGATGCTCCAGATCAACACTTGAAGGCACAGGTAGAACATGATACTTTCCATCATATTACAACACCATGTGTCCCAACTCCATCAGGTGTAAAGCCAGAACCATCAGAATACAAGGTTTCCTCAACTCCATGTGTGGAGTCCCTGAAGATAAGAGGTGTCCCAACTCTAGGTTCACTATGCTTTGACTCCACCCTTCCACATGTAGATGAGTTAGTCTCTTCTGGAAAATCTGGGTCCTCCAATTCTACAAAAGAAGCCTCAGATCAACACTTGGAGGCACAAGTAGAGCATCATATTACAATAACAACCTCTAGTTTACAGTCATTCCCTTCTGGAAACTTGGGGTATTATTTTAAATCTACAGAAGAGGCTTCACAGAAGATTTTAAAGGGACTAAATGATGATAATTGCTATGCAATTGGATTGTATGGAAAGAGGGGCTCCGGTAAAACAACATTAATCAGAGCTGAGATGGAAGAGTATGAAAAGATTTATCATACAGTGATATTTCTCACTGTGTATGAGAATCAAGATATCAAGAGCATTCGAGTGGGAATTGCTAGCTCCTTGAACGTGTTTGAAAAAGATGACAGTGATGGTGCAAGAATAGTGAAAATAATTTCAGCATTAGAAAGGAAGGATAGAACTACTCTAGTCATCTTGGATAATTTTCCATCAATGTCTAAACTGGAAGAATTAGGTATTCCTTATAAGAGCAAACAGTACAAGTTCCTTTTGACCACTCGCCATGAGACAGACTGCACCTCAATGGGATGTGATCATTTGATTCTTTTGAAGCCCTTATCTAATAAAGAAGCTTTTGCCCTGCTACAAAAACTTTCAGGTGCTGACTCCCATATTGATCTAGTACGAGATGTTGCTTTTAAATGCAATGGCTTGCCGGGTTTGATTAAAGATGTGGCATCTTCCTTGAAAAATAAGTCTACTGTGAAGTGGGAAGAATCATTAGTTAGTTTAAGCCACTCAACAGCCCGCTACCAAATTTTTATCAGCTTCAGAGGATATGATACTAGAGAGATTTTCACAAACCATCTCTATGATGCTTTGTGTAAGGCGGGATTCCAAACGTTCAAAGATGATCAAGCATTGGAGGGCGGAGCCCCAATTGAGAAACTTCTTGAAGACATTGAAGAATCAAGGTTTGCAATTGTTATTTTGTCAAAAAACTTTGCAGACTCTAAATGGTGTCTTAAAGAACTTGTCAAGATTCTTGACTGCCAGAAGAGGAAGAAACAATTGGTTTTGCCAATTTTTTATGAAGTGGAACCAACCGACATAAGGCATCTAAAAGGGAGGTATGGTGAAGCTATGGCTGAACATGAAAAAAAGTTAGCAAAAGGTTCTAAGACGGTACTGGAATGGACACTGGCTTTGAGTGATATTTCTCAATTGAAAGGAGAATATTTCAACATTTCCAACTTGAAAGAAGAGCACTACGAGAGGGCCAGAGATGAATTTATTGGAAAGATCATAAGATTTGCCCTTAATAACAGACATCGCTTACATATACAAAGCATGTATATCAACTAG 3162 0.4352 MAMKGQGIAIGIDLGTTYSCVGVCKQHARIEIIPNDQGNRTTPSYVAFTDSGRLVGDAAKNQVTRNPTNTIFDAKRLIGRKFSDASVQTDMKLWPFKVISGTVDKPMIVVNYKSEEKQFTAEEISSMVLMKLRAIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAALAYGLDTGADTVDFDKDVLIFDLGGGTFDVSVLNIYNGVFDVKATAGDTHLGGEDFDNRMVNHFVEEFKRKHEKDISGNPRALRRLRTACERAKRTLSSTVQTTLEIDSLYEGIDFYTAITRDRFEELNMDLFRNCMETVERCLRDAEMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVACGAAIQAAILTGEDTEAITEFILCDVTPISLGVETVGGVMNVLIQKNQTIPFKNERVFSTYSDNQPGVSIKVYEGEKTCSRDNYLLGKFELSGIPPAPKGVPQINVCFHIDNNGILNVSAEDKTTGNKNKITITNHKGRLSKEEIEKMVQEAEKYYSTKDAPDQHLKAQVEHDTFHHITTPCVPTPSGVKPEPSEYKVSSTPCVESLKIRGVPTLGSLCFDSTLPHVDELVSSGKSGSSNSTKEASDQHLEAQVEHHITITTSSLQSFPSGNLGYYFKSTEEASQKILKGLNDDNCYAIGLYGKRGSGKTTLIRAEMEEYEKIYHTVIFLTVYENQDIKSIRVGIASSLNVFEKDDSDGARIVKIISALERKDRTTLVILDNFPSMSKLEELGIPYKSKQYKFLLTTRHETDCTSMGCDHLILLKPLSNKEAFALLQKLSGADSHIDLVRDVAFKCNGLPGLIKDVASSLKNKSTVKWEESLVSLSHSTARYQIFISFRGYDTREIFTNHLYDALCKAGFQTFKDDQALEGGAPIEKLLEDIEESRFAIVILSKNFADSKWCLKELVKILDCQKRKKQLVLPIFYEVEPTDIRHLKGRYGEAMAEHEKKLAKGSKTVLEWTLALSDISQLKGEYFNISNLKEEHYERARDEFIGKIIRFALNNRHRLHIQSMYIN* 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2632 1053 Gene3D - 646 801 IPR027417 -
Lja1g2632 1053 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Lja1g2632 1053 ProSiteProfiles TIR domain profile. 868 1039 IPR000157 GO:0007165
Lja1g2632 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 659 863 IPR027417 -
Lja1g2632 1053 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 386 557 IPR029047 -
Lja1g2632 1053 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 396 543 IPR029047 -
Lja1g2632 1053 SUPERFAMILY Actin-like ATPase domain 9 191 IPR043129 -
Lja1g2632 1053 Gene3D - 72 127 - -
Lja1g2632 1053 Gene3D - 10 385 - -
Lja1g2632 1053 MobiDBLite consensus disorder prediction 609 628 - -
Lja1g2632 1053 Gene3D - 863 1043 IPR035897 -
Lja1g2632 1053 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Lja1g2632 1053 SMART till_3 869 1008 IPR000157 GO:0007165
Lja1g2632 1053 Gene3D Actin; Chain A, domain 4 237 320 - -
Lja1g2632 1053 PRINTS 70kDa heat shock protein signature 479 495 - -
Lja1g2632 1053 PRINTS 70kDa heat shock protein signature 211 221 - -
Lja1g2632 1053 PRINTS 70kDa heat shock protein signature 339 355 - -
Lja1g2632 1053 PRINTS 70kDa heat shock protein signature 398 417 - -
Lja1g2632 1053 PRINTS 70kDa heat shock protein signature 371 391 - -
Lja1g2632 1053 PRINTS 70kDa heat shock protein signature 8 21 - -
Lja1g2632 1053 PRINTS 70kDa heat shock protein signature 37 49 - -
Lja1g2632 1053 PRINTS 70kDa heat shock protein signature 59 67 - -
Lja1g2632 1053 PRINTS 70kDa heat shock protein signature 147 167 - -
Lja1g2632 1053 Pfam NB-ARC domain 663 868 IPR002182 GO:0043531
Lja1g2632 1053 Pfam TIR domain 870 1009 IPR000157 GO:0007165
Lja1g2632 1053 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Lja1g2632 1053 Gene3D - 193 368 - -
Lja1g2632 1053 MobiDBLite consensus disorder prediction 610 625 - -
Lja1g2632 1053 SUPERFAMILY Actin-like ATPase domain 201 390 IPR043129 -
Lja1g2632 1053 PANTHER HEAT SHOCK PROTEIN 70KDA 1 545 IPR013126 GO:0005524|GO:0140662
Lja1g2632 1053 CDD HSPA1-2_6-8-like_NBD 9 389 - -
Lja1g2632 1053 Pfam Hsp70 protein 9 552 IPR013126 GO:0005524|GO:0140662
Lja1g2632 1053 SUPERFAMILY Toll/Interleukin receptor TIR domain 863 1008 IPR035897 -
Lja1g2632 1053 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2632 Lja-Chr1 30857771 30862428 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2632 1 549 Calmodulin-binding Proteins AT3G12580 79.964 0.0 903
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2632 K03283 - jre:108986352 873.618