Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2630 ATGATTCCACTTTTCACTTTGCTGATTCCACTTGCCTATTTTCTGAGTACCTGCTTAGGAAACACTAATGACATCTATCTCCAATTGAATGATGATGTTCTTGGCCTGATTGTGTTCAAATCAGACCTGCATGACCCTTCTTCACATCTTGCTTCATGGAATGAAGATGATGCTACCCCATGTTCATGGCAGTTTGTGCAATGCAATCCCAAGAGTGGAAGAGTCTCAGAACTCTCGTTGGATGGCTTAGGATTATCAGGGAAGATAGGAAGAGGCCTTGAGAAGTTGCAGCATCTAATGGTATTGTCCCTTTCTCATAATAACTTGAGTGGTACTATTAGTCCTTCACTTTCTCTTTCTAGCACTCTTCAAAGGGTCAACCTTAGTCACAATGCTCTTTCTGGTCCTGTTCCCACTTCTTTTGTCAACATGAGTTCAATAAGATTTCTTGATCTCTCATACAATTCATTCTCAGGACCAATCCCTGAAAGTTTCTTTGGAAGCTGTTTTTCCCTTCATTACCTTTCTCTAGCTAGGAACATGTTTGAAGGACAAGTTCCTAGAACACTTTCTACATGTTCCTCATTGAATCACCTTGATCTTTCCAATAATGGTTTCTCTGGTAATGTGGACTTTGCTGGGATCTGGTCAATGAACAGGCTTAGGAATTTGGATCTATCCAACAATGACTTCACTGGGAACTTACCCAATGGAATTTCATCCATACATAACTTGAAGGGGATGTTTTTGCAAAACAACCAGTTTTCAGGTCCACTACCTACTGATATTGGACTGTGCCTGCATTTGAATAGGTTGGATTTTAGCCATAATCAGTTCAGTGGGGAACTTCCACAGTCACTTGGGAGGCTTAACTCTTTGAGCTATTTAAGGGCATCAAATAATCTTTTAACCACTGAATTACCTCAGTGGATAGGGAACATGACTAGTCTAGAATATCTAGAGCTCTCAAACAATGAGTTTTATGGAAACATCCCTTTGTCATTGGTTTCATGCACACAATTATCTGTGATAAGGCTAAGAGGTAATAGTTTCAATGGTACCATACCAGAGGGTTTGTTTGGCCTAGGATTGGAGGAAATAGATTTTTCCCATAATGATTTGTCAGGTTCAGTTCCAGCAGGCTCAAGCAGGCTCTTAGAAACTATCACAAAATTGGATCTTTCAGCTAACCATCTCCAAGGGAATATCCCTGCAGAAATGGGATTTCTTTCAAAGCTAAGATACTTGAACCTGTCTTGGAATAATGATCTTCACTCACAGATGCCCCCAGAGTTTGGTCTCCTTCAGAACCTAACTGTTTTAGATCTTAGTAACAGTGCTTTGTATGGTCCTGTTCCACCAGATCTATGTGATTCAGGAAATTTGGCAGTCCTTCAACTTGATGGAAATTCATTGAAGGGGTCTATTCCAGAAGAGATTGGGAATTGCACATCTCTTTACTTGCTGAGTTTATCTCACAATAAGTTGACAGGTTCAATCCCAAAGTCCATGTCAAAGCTGAACAAGCTCAAAATCCTGAAATTGGAATTCAATGAATTAAGTGGAGAGATACCAATGGAGCTTGGAATGCTTCAAAATCTTCTTGCTGTGAACATATCATATAACAGGCTCACAGGCAGGCTTCCTACTAGTAGCATATTTCAGAACTTGGACAAAAGTTCCTTGGAAGGAAACTTGGGTATTTGCTCACCCTTGTTGAAGGGTCCATGTAAAATGAATGCCCCCAAGCCACTTGTAATAGACCCAAATGCCTATAACAACCAAATCGGTCCTCCAAGGCAAAGAAATGACTCATCTGTGTCATCTACCCCAACTCATCACCACAGGTTCTTCAGTGTTTCTGCTATTGTAGCAATTTGTGCATCCTTTCTCATTCTACTAGGAGTGATTGCTATTAGCCTGCTAAATGTTTCTGTGAGGAGAAGGCTATCATTTGTTGATAATGCTTTGGAAAGCATGTGCTCAAGCTCTTCTAGATCAGGAGCTCCACCAACAACAGGAAAGCTTGTTCTGTTTGATTCCCATCATTCCTCACCTGATTGGATCACCAATCCAGAATCCTTGCTCAACAAAGCATCTGAGATTGGAGAAGGAGTGTTTGGAACAGTTTACAAGGTCCCATTGGGATCATCAACATCACAAGGTCGGGTGGTTGTAGCAATCAAGAAGCTTATTACCTCAAACATACTCCAATATCCAGAAGACTTTGACAGGGAAGTTAGAATCTTAGGCAAAGCAAAGCACCCAAATCTAGTAGCATTGAAAGGATACTACTGGACTCCTCAATTACAGTTTTTGGTTTCTGAATTTGCACCAAATGGTAACCTCCAATCCAAGCTACATGAGAGGCTTCCTTCAAGTCCTCCACTTTCTTGGCCTATAAGATTCAAAATCTTGCTTGGAACAGCAAAAGGGCTTGCCCATTTGCACCATTCATTCAAACCACCAATCATTCACTACAACATAAAGCCAAGCAACATTTTACTTGATGAAAATTTCAACCCCAAGATCTCAGACTTTGGGCTAGCTAGGCTTTTAACAAAGCTAGACAGGCATGTGATGAGTAACAGGTTTCAGAGTGCACTGGGATATGTGGCCCCAGAATTAGCTTGCCAGAGCTTAAGGGTCAATGAGAAATGTGATGTGTATGGTTTTGGGGTGATGATCCTCGAATTGGTGACAGGTAGGAGGCCAGTGGAGTATGGAGAAGACAATGTGCTGATACTGAATGATCATGTGAGGGTTTTGCTTGAGCATGGGAATGTGTTGGAATGTGTGGATCCAAGCATGAGTCATGAGTACCCTGACGATGAGGTGTTGCCAGTTCTGAAGCTTGCAATGGTGTGCACCTCTCAAATACCTTCTAGCAGGCCTACTATGGCAGAAGTGGTGCAAATTCTTCAGGTCATCAAAACACCAGTTCCTCAAAGGATGGATGAGACATGCTTCTCTGTTTAA 2979 0.4149 MIPLFTLLIPLAYFLSTCLGNTNDIYLQLNDDVLGLIVFKSDLHDPSSHLASWNEDDATPCSWQFVQCNPKSGRVSELSLDGLGLSGKIGRGLEKLQHLMVLSLSHNNLSGTISPSLSLSSTLQRVNLSHNALSGPVPTSFVNMSSIRFLDLSYNSFSGPIPESFFGSCFSLHYLSLARNMFEGQVPRTLSTCSSLNHLDLSNNGFSGNVDFAGIWSMNRLRNLDLSNNDFTGNLPNGISSIHNLKGMFLQNNQFSGPLPTDIGLCLHLNRLDFSHNQFSGELPQSLGRLNSLSYLRASNNLLTTELPQWIGNMTSLEYLELSNNEFYGNIPLSLVSCTQLSVIRLRGNSFNGTIPEGLFGLGLEEIDFSHNDLSGSVPAGSSRLLETITKLDLSANHLQGNIPAEMGFLSKLRYLNLSWNNDLHSQMPPEFGLLQNLTVLDLSNSALYGPVPPDLCDSGNLAVLQLDGNSLKGSIPEEIGNCTSLYLLSLSHNKLTGSIPKSMSKLNKLKILKLEFNELSGEIPMELGMLQNLLAVNISYNRLTGRLPTSSIFQNLDKSSLEGNLGICSPLLKGPCKMNAPKPLVIDPNAYNNQIGPPRQRNDSSVSSTPTHHHRFFSVSAIVAICASFLILLGVIAISLLNVSVRRRLSFVDNALESMCSSSSRSGAPPTTGKLVLFDSHHSSPDWITNPESLLNKASEIGEGVFGTVYKVPLGSSTSQGRVVVAIKKLITSNILQYPEDFDREVRILGKAKHPNLVALKGYYWTPQLQFLVSEFAPNGNLQSKLHERLPSSPPLSWPIRFKILLGTAKGLAHLHHSFKPPIIHYNIKPSNILLDENFNPKISDFGLARLLTKLDRHVMSNRFQSALGYVAPELACQSLRVNEKCDVYGFGVMILELVTGRRPVEYGEDNVLILNDHVRVLLEHGNVLECVDPSMSHEYPDDEVLPVLKLAMVCTSQIPSSRPTMAEVVQILQVIKTPVPQRMDETCFSV* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2630 992 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 986 - -
Lja1g2630 992 ProSitePatterns Protein kinases ATP-binding region signature. 702 730 IPR017441 GO:0005524
Lja1g2630 992 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Lja1g2630 992 CDD STKc_IRAK 702 975 - -
Lja1g2630 992 Gene3D Transferase(Phosphotransferase) domain 1 778 988 - -
Lja1g2630 992 Gene3D Ribonuclease Inhibitor 188 286 IPR032675 -
Lja1g2630 992 MobiDBLite consensus disorder prediction 594 610 - -
Lja1g2630 992 SMART LRR_typ_2 290 314 IPR003591 -
Lja1g2630 992 SMART LRR_typ_2 144 168 IPR003591 -
Lja1g2630 992 SMART LRR_typ_2 410 434 IPR003591 -
Lja1g2630 992 SMART LRR_typ_2 435 459 IPR003591 -
Lja1g2630 992 SMART LRR_typ_2 96 120 IPR003591 -
Lja1g2630 992 SMART LRR_typ_2 218 242 IPR003591 -
Lja1g2630 992 SMART LRR_typ_2 531 556 IPR003591 -
Lja1g2630 992 SUPERFAMILY L domain-like 299 562 - -
Lja1g2630 992 Pfam Leucine rich repeat 461 520 IPR001611 GO:0005515
Lja1g2630 992 Pfam Leucine rich repeat 98 156 IPR001611 GO:0005515
Lja1g2630 992 SUPERFAMILY Protein kinase-like (PK-like) 697 983 IPR011009 -
Lja1g2630 992 Gene3D Ribonuclease Inhibitor 293 583 IPR032675 -
Lja1g2630 992 Pfam Protein kinase domain 698 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g2630 992 Gene3D Phosphorylase Kinase; domain 1 682 777 - -
Lja1g2630 992 SUPERFAMILY L domain-like 46 387 - -
Lja1g2630 992 Gene3D Ribonuclease Inhibitor 32 187 IPR032675 -
Lja1g2630 992 PANTHER BNAA09G02190D PROTEIN 10 986 - -
Lja1g2630 992 ProSiteProfiles Protein kinase domain profile. 696 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g2630 992 MobiDBLite consensus disorder prediction 591 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2630 Lja-Chr1 30832061 30836453 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2630 5 985 Receptor kinase-like Gene Family AT3G28040 62.747 0.0 1211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Lja1g2630 Pkinase 1.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2630 - - pvu:PHAVU_008G017400g 1562.74