Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2627 ATGGAATTTTCTTCGTTTTCTTCTTCCTTCATCTTCCACTTCAACCGCTTCAGAACCATCGCGAACTCGTTCCTCTCGCAATACGAGCCACTCGCTCTGCTCATCGTTCCTCTCATCTCCCTCCTCATCGCTCACGCACTTCGCTCTTTCCTCAACATCCTCCATGACAAGGGACTCAAAGCAACTATCCTAGGGTTTCTCATGACCTCCATCAAATTGGTTCCTGGTGTGAAGAGTTACATTGATGCTGAGAAAAAGAAGGTTGTGGAGAAGATGCAGTCTGATGGTAAATCTAAAAGAGAAGGTTGGCAAACAGAGTTGCCAAGCACGGGATTAGGAACATCTATCCTTGAGAAAATGAGGGAGGAGAAAAGAAAAGATGTGATTTGGCAAGGCAAATGCTCTGGTACAGTCTACATTGGTGGAAATGAATCTGAGGGTCATTTTTCTCTGATAAATGAGGCATGCTCAATGTTTGCACATACCAATCCTTTGCATATGGATGTTTTCCAGAGTGTTGTACGCTTTGAGGCAGAAGTGGTTGCAATGACAGCGGCATTTCTTGGAAGTAAAGAAAAGACATCCGGAGGACAAATATGTGGCAACATGACCTCAGGAGGGACTGAAAGTATATTATTAGCTGTTAAATCAGCTCGTGATTATATGAAATCTAAGAAAGGAATTACAAGACCCGAAATGATAATTCCTGAGTCTGGACACTCGGCATATGACAAAGCTGCACAGTATTTTAATATCAAACTATGGCGTGTTCCAGTTAACAAAAGTTTTCAAGCAGATGTGAGAGCAACTCGACGTCATATTAACAAAAATACCATTTTGATTGTTGGATCTGCTCCTGGGTATCCTCATGGAATAATTGACCCCATCGAAGAACTTGGTCATCTAGCCTCAAGCTATGGTGTTTGTTTCCACGTGGACCTTTGCCTTGGTGGCTTTGTATTGCCTTTTGCTCGTGAGCTTGGGTACCACATTCCACCTTGTGATTTTTCTGTTCAAGGGGTTTCTTCAATATCAGTGGATGTGCATAAATATGGGTTAGCTCCCAAAGGAACAAGTGTAGTTCTATATAGGAATCATGAAATCAGAAAGCATCAATTTGTTGCTGTTACCGAGTGGTCCGGTGGGTTGTATGTATCTCCCACCATGGCTGGAAGCAGGCCTGGAAGCCTTATTGCTGGTGCATGGGCAGCAATGATGTCTCTTGGAAAAGATGGTTACTTGAGAAATACAAAAGCACTTATGGAAGGATCAAAAAGTATACAGAAAGGCATAGAAGAGATTGCAGAATTGTTTGTCGTTGGAAGACCCGATATGACAATCGTAGCGTTTGGATCGGATGTTCTGGATATATTTGAAGTTAACGATATTATGTCATCTAAAGGGTGGCATTTGAATGCATTGCAGAGACCCAACAGCATCCATATCTGTGTAACACTACAGCTTGTACCAGCTGTTGACGACTTTCTCAAGGATCTAAAGGAATCTGTGGAAACTGTGAAAAAAAATCCTGGCCCAATAAGTGGAGGCCTAGCACCTATATATGGCGCCGCAGGGAAAATGCCAGATAGAGGCATGGTCCAGGAGTTGCTGGTAGATTTTATGGACGGTACCTGCTAG 1638 0.4298 MEFSSFSSSFIFHFNRFRTIANSFLSQYEPLALLIVPLISLLIAHALRSFLNILHDKGLKATILGFLMTSIKLVPGVKSYIDAEKKKVVEKMQSDGKSKREGWQTELPSTGLGTSILEKMREEKRKDVIWQGKCSGTVYIGGNESEGHFSLINEACSMFAHTNPLHMDVFQSVVRFEAEVVAMTAAFLGSKEKTSGGQICGNMTSGGTESILLAVKSARDYMKSKKGITRPEMIIPESGHSAYDKAAQYFNIKLWRVPVNKSFQADVRATRRHINKNTILIVGSAPGYPHGIIDPIEELGHLASSYGVCFHVDLCLGGFVLPFARELGYHIPPCDFSVQGVSSISVDVHKYGLAPKGTSVVLYRNHEIRKHQFVAVTEWSGGLYVSPTMAGSRPGSLIAGAWAAMMSLGKDGYLRNTKALMEGSKSIQKGIEEIAELFVVGRPDMTIVAFGSDVLDIFEVNDIMSSKGWHLNALQRPNSIHICVTLQLVPAVDDFLKDLKESVETVKKNPGPISGGLAPIYGAAGKMPDRGMVQELLVDFMDGTC* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2627 545 Gene3D - 105 542 - -
Lja1g2627 545 Pfam Pyridoxal-dependent decarboxylase conserved domain 151 450 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lja1g2627 545 PANTHER - 25 545 - -
Lja1g2627 545 Gene3D Aspartate Aminotransferase, domain 1 114 508 IPR015422 GO:0003824
Lja1g2627 545 SUPERFAMILY PLP-dependent transferases 104 509 IPR015424 -
Lja1g2627 545 Gene3D - 142 409 IPR015421 GO:0003824
Lja1g2627 545 PANTHER SPHINGOSINE-1-PHOSPHATE LYASE 1 25 545 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2627 161 503 Calmodulin-binding Proteins AT5G17330 23.611 4.18e-21 94.7