Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2615 ATGGAGTCCAAACATCAGACACCAAGTGTAATTTTAAAATTGATGGGACTTGGTAATGTTTATGTGCCTCCTCAACATGCTGTTAGACTTAAACAGAAAGTTCTCTCTGAGAATTACCTACAGAAAGTTGCTTCTATTGGTGTCAGAAAGCGGCGTTCGTCTCACCAGCATCATTCCTCTAGAATGAGTACTGATGAAAAGGAAGAATCCGATTATGTTTTGAAAGTAGTCAAAACAATAAAGAGAGACAAGGACCATAATCCATCAAAGGGATATGGCAAAGAGAACCCATATTTGTCAGGTATAAAGCTAAAAAGTGTAAATTCAGCAATGCGACTGCAACAGAAAATGAATAATGAGCTTCAAAATGATGTGCCTGGAGAAACTGGATTATATGAAGCATTCAGGCCTTCAAAACCTCAATTGAACCTGAAGGATGATGACACTTTCAACTCAAGAATCTCTGAAGCCGAGAATAAAACTTTGGAACTGAAGGTTCTGACTGAGAAATTGCTAGAAGTTCAAGAGCATGGTTATTTGTGTCGTCAAAGTGGTTTTTGCAATGATAAAGTTAAAAGGAACATTAGAAGTAAGGTTGGTGCGAATTATAACTTTGCCAGAAAAGTGCCAATGGATCTTTGTGAAGCTTCTGTTGTTGGTGATAATTGTGGAACTGTGACTAAGGATTACTTGTTTCAGAAATATTGGGGTTTGAGGAAGAATGCATCTGTGAATTGGTCAACCCGGAAGCTAAAGAACCAAAATATTAATCAGAAAGATTGTTCAGAAGATATGAACCCCAGGTCCAGCAGTGCGAATTCCCCTTCTTTTTCCTCTGATTTCAGTTGTAATCGTACTGAAGAGAATTGTATTGTTATGCATAAGTTGAAGAATAGATGTTGCAGGAGTGATTGGTTCCATAAGGATCCTATGCTTCTTCAATTTTCTAAGCTGATCAAAGAAAGGGAGAACGATAAACACGAAAACAGTAATATGTCTAAGCAAATTGCTGCATCTCCTGATTCATCAGTTGATTGCTTGGTGTCTGGTGCAAAGACTAAGGTTGTTGTCCGGTCACATAATAATCGTACCAAGCAGCAATCTGAATCAACAGCATCCATTTTGTCACATCAAGACAATGATGCTTGGAGTCATACTTCTAATGCTTCAACGCAACAGGATACATCAGAGCTTCAAGAAGATTCTGTTTATTCACTTTTCTCTGGGGCTGACAAAGATTCCCTTGGTAGCTTCAAGGAGGCATACAAACCTAGTCCAATTTCAGTTTTGGATCCCTCATTCAGTGAAGGCAATTCATTCACCTCTGAATGTGTTGCTGGTTTATGTGATTCCTCTGAAGTGGATGATGAAGGCCTTAGTTTGAATGTTTCAAGTGATGAAGAGTGTGAGAATGAATCTGTAGGAAACTTTGGAGCACAGAAAGATATAGTAGGATTATCTAGAACTGAAGAAAGTAGGGATTTCTCCTATGTTGTTGAGGTCTTAACCGAGGCAGGTACATCTAATAGGAAGTTGTTCACAGACTTCTCTACATGGCACTCTGTAGAATGCCCTATTAGCCCTTCTGTTTTCGAAATTCTGGAAAAGAAATTCGGCGAGCAGCAACTCTGGAAAAGATCCGAAAGGCGGCTTCTCTTCGATCGCATCAATCTTGGGCTGTTAGAGATTCTGCAGCCATGTTTATATCTCCCAATGTGGGAAAAGCCTGTGTCAAGAAGGTTGAATGCTGAACCAAGCCAGGACATGATCCAGGAGGAGATGTGGGGGTTGCTTGTTGCTGAAGAAAAGAAAGCCGGTATGGGGTCGGTTGACGATATGCTTGGAGGGGAAATCAGGTGGATAGAACTAGGTGAAGATGTTGAAGATATTGTTAAGGAAATAGTTAAGTTGTTAATAGAGGAGCTAGTTAGCTTGGAGAATTTTGAAAACTCTAGTTTTGTGTGA 1965 0.3975 MESKHQTPSVILKLMGLGNVYVPPQHAVRLKQKVLSENYLQKVASIGVRKRRSSHQHHSSRMSTDEKEESDYVLKVVKTIKRDKDHNPSKGYGKENPYLSGIKLKSVNSAMRLQQKMNNELQNDVPGETGLYEAFRPSKPQLNLKDDDTFNSRISEAENKTLELKVLTEKLLEVQEHGYLCRQSGFCNDKVKRNIRSKVGANYNFARKVPMDLCEASVVGDNCGTVTKDYLFQKYWGLRKNASVNWSTRKLKNQNINQKDCSEDMNPRSSSANSPSFSSDFSCNRTEENCIVMHKLKNRCCRSDWFHKDPMLLQFSKLIKERENDKHENSNMSKQIAASPDSSVDCLVSGAKTKVVVRSHNNRTKQQSESTASILSHQDNDAWSHTSNASTQQDTSELQEDSVYSLFSGADKDSLGSFKEAYKPSPISVLDPSFSEGNSFTSECVAGLCDSSEVDDEGLSLNVSSDEECENESVGNFGAQKDIVGLSRTEESRDFSYVVEVLTEAGTSNRKLFTDFSTWHSVECPISPSVFEILEKKFGEQQLWKRSERRLLFDRINLGLLEILQPCLYLPMWEKPVSRRLNAEPSQDMIQEEMWGLLVAEEKKAGMGSVDDMLGGEIRWIELGEDVEDIVKEIVKLLIEELVSLENFENSSFV* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2615 654 MobiDBLite consensus disorder prediction 48 69 - -
Lja1g2615 654 PANTHER DUF4378 DOMAIN PROTEIN 1 121 - -
Lja1g2615 654 Pfam Domain of unknown function (DUF4378) 494 643 IPR025486 -
Lja1g2615 654 PANTHER AFADIN 1 121 - -
Lja1g2615 654 Coils Coil 104 124 - -
Lja1g2615 654 PANTHER DUF4378 DOMAIN PROTEIN 181 643 - -
Lja1g2615 654 MobiDBLite consensus disorder prediction 358 397 - -
Lja1g2615 654 PANTHER AFADIN 181 643 - -
Lja1g2615 654 MobiDBLite consensus disorder prediction 257 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2615 Lja-Chr1 30703941 30707876 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2615 420 644 TRM (TON1 Recruiting Motif) Superfamily AT2G39435 33.878 4.64e-32 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2615 - - cam:101499857 662.914