Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2603 ATGGAGATAACGTACGCATCGCCAAGCTTCGCCAACCTCGCCACCATGCCGACCACCGGTTCTCGCACCGTCAGGGTAATCCCCCTTCAGCACCCCACCGCCACCGCGTCGCCATCGTCGTCGCCGAATGCCGTGATCTCCGAGTGGACCTCGAAGCTCCGGCGAATGACGTGGCTCCACTGGATCGAGTTCTTCCTCCCTTGCTCCCGCTGGATTCGCACCTACAAATGGCGTGACTACCTCCAGACCGATGTCATGGCCGGCGTTACCGTCGGCGTCATGCTTGTTCCTCAGTCGATGTCATATGCAAAATTAGCTGGGCTTCAACCGATATATGGACTCTACTCTGCTTTTGTGCCCATATTTGTGTATGCCGTATTTGGGTCTTCTCGCCAGCTTGCAGTTGGCCCCGTGGCATTGGTTTCTCTCTTGGTCTCCAATGTGCTAAGTAGCGTAGCTGATTCATCCAGTGAATTATACACAGAGTTGGCATTATTATTGTCTCTTATGGTTGGGATACTGGAGTGCACAATGGGACTCTTGAGGCTCGGATGGCTGCTTCGTTTCATTAGCCATTCGGTAATTTCTGGTTTTACAACTGCGTCAGCTATTGTGATTGGTTTATCTCAAGCAAAATACTTCTTGGGGTATGATATAGTGGGAAGTAGCAAGATCATACCACTGATTAAAAGTATAATAGATGGAGCAGATAAGTTCTCATGGCCCCCTTTTCTGATGGGATCAGTTATGCTTGCAATACTACTTGTCATGAAACACCTGGGAAAATCGAGGAAGTACTTGCGATTCTTGAGAGCTATGGGTCCTCTTACAGCAGTTGTTCTGGGAACACTTTTTGCAAAAATATTTCATCCATCATCAATTTCTTTGGTCGGAGATATACCTCAGGGTCTACCAAGCTTTAACGTTCCTAAAGCTTTTGAGTATGCAGAGTCCTTAATTCCAACTGCTTTTCTTATAACAGGCGTGGCAATACTGGAATCTGTAGGAATTGCAAAGGCATTAGCAGCAAAGAATGGTTATGAGTTGGATTCAAACCAAGAGTTGTTTGGTCTTGGCGTTTCCAATGTTCTTGGTTCATTCTTTTCAGCATACCCCACAACAGGATCCTTTTCAAGATCAGCTGTTAATCATGAAAGTGGTGCAAAATCTGGAGTGTCTGGGATAGTTTCAGGAATTATAATAACCTGTGCACTCTTGTTTCTAACGCCATTATTTGAGTACATACCTCAGTGTGCTCTTGCTGCCATTGTGATCTCTGCTGTGATAGGTCTGGTAGATTATGATGAGGCCATTTTTTTGTGGCGTGTAGATAAGAAAGATTTTCTTCTTTGGACCATTACTAGCACTACAACGTTATTCCTTGGTATTGAGATTGGTGTACTTGTTGGGGTTGGGGTGTCACTTGCTTTTGTCATTCATGAGTCAGCAAATCCACACATTGCTGTTTTGGGTCGTTTGCCTGGGACAACTGTTTATAGAAATATTAAACAATATCCCGAAGCATATACATACAATGGAATCGTAGTTGTTCGTATTGACGCTCCTATTTATTTTGCAAACACAAGTTACATAAAGGACAGGTTGCGGGAATATGAACTTGATGTTGATAGTTCTACAGGACGTGGACCTGAGGTTGAAAGAATTTATTTTGTGATCATAGAGATGGCGCCTGTGACCTACATAGATTCTAGCGCAGTTCAGGCTTTGAAAGACTTGTATCAGGAGTACAAATTACGGGATATTCAGATTGCAATATCCAATCCAAACCCAGAAGTTCTGGTTACCTTGTCTAGATCCGGTGTGGTGGAGTTGATAGGCAAAGAATGGTACTTTGTGAGAGTACATGATGCTGTTCAAGTTTGCTTACAGCATGTTCAAAGCTTGAAATCTGGATCTAGCAGTCCACAATCACGTCTCTCTTTCTCTTCAGCTACGGACTTGGAGTCTGGTACTGGCAGGCTTTCACTCTCCAGGGACAGAGATTCCCCATTGGAGCCATTGTTGTCAAAAGATCGTTGA 2040 0.4451 MEITYASPSFANLATMPTTGSRTVRVIPLQHPTATASPSSSPNAVISEWTSKLRRMTWLHWIEFFLPCSRWIRTYKWRDYLQTDVMAGVTVGVMLVPQSMSYAKLAGLQPIYGLYSAFVPIFVYAVFGSSRQLAVGPVALVSLLVSNVLSSVADSSSELYTELALLLSLMVGILECTMGLLRLGWLLRFISHSVISGFTTASAIVIGLSQAKYFLGYDIVGSSKIIPLIKSIIDGADKFSWPPFLMGSVMLAILLVMKHLGKSRKYLRFLRAMGPLTAVVLGTLFAKIFHPSSISLVGDIPQGLPSFNVPKAFEYAESLIPTAFLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVSNVLGSFFSAYPTTGSFSRSAVNHESGAKSGVSGIVSGIIITCALLFLTPLFEYIPQCALAAIVISAVIGLVDYDEAIFLWRVDKKDFLLWTITSTTTLFLGIEIGVLVGVGVSLAFVIHESANPHIAVLGRLPGTTVYRNIKQYPEAYTYNGIVVVRIDAPIYFANTSYIKDRLREYELDVDSSTGRGPEVERIYFVIIEMAPVTYIDSSAVQALKDLYQEYKLRDIQIAISNPNPEVLVTLSRSGVVELIGKEWYFVRVHDAVQVCLQHVQSLKSGSSSPQSRLSFSSATDLESGTGRLSLSRDRDSPLEPLLSKDR* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2603 679 MobiDBLite consensus disorder prediction 660 679 - -
Lja1g2603 679 PANTHER SULFATE TRANSPORTER 36 648 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lja1g2603 679 TIGRFAM sulP: sulfate permease 67 624 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lja1g2603 679 ProSiteProfiles STAS domain profile. 504 628 IPR002645 -
Lja1g2603 679 CDD STAS_SulP_like_sulfate_transporter 505 621 - -
Lja1g2603 679 Pfam STAS domain 505 624 IPR002645 -
Lja1g2603 679 MobiDBLite consensus disorder prediction 636 679 - -
Lja1g2603 679 ProSitePatterns SLC26A transporters signature. 110 131 IPR018045 GO:0008271|GO:0008272
Lja1g2603 679 MobiDBLite consensus disorder prediction 636 659 - -
Lja1g2603 679 PANTHER SULFATE TRANSPORTER 4.1-RELATED 36 648 - -
Lja1g2603 679 SUPERFAMILY SpoIIaa-like 506 628 IPR036513 -
Lja1g2603 679 Pfam Sulfate permease family 81 454 IPR011547 GO:0016021
Lja1g2603 679 Gene3D STAS domain 484 632 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2603 Lja-Chr1 30457659 30465867 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2603 3 649 Inorganic Solute Cotransporters AT5G13550 71.795 0.0 963
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2603 K18059 - gmx:100775789 1088.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2603 1 30457659 30465867 Lja1g2603 1 30457659 30465867 ECH