Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2589 ATGTCTTTTCAGCATAAAAGCTTTTGGATGCCGCGGGATGCTGGCTGCTTGGCTGAAGAAAATGTTGGATATGAGAACTCTTCCAGAATTGAACCAAAGCGGAGTCATCAGTGGTTTATGGATACAGGCGAATCAGAAGTATTCAGCAACAAAAAACAAGCAGTTGAAGCTGTTAGTGACAGGCCAGTATCAGGAGTTTCACATGTGAATGTTTCTCAATGGGACACCAATTCAGGGTTTCATTCAGTCACAGGTCAATTTTCTGATCGTCTCTTTGGATCTGATGTACGGAATGTCAATTTGGTTGATAAAAACATGCCATCAATTGGAAGTGGAAATCTGAACATGGGAAGGAAAGATTTTGGGAATCAATATGGTAATGATCCATCTATGGGATTGTCAATTACCATTCCAGACCCTTCATCATGTCTGAATTTTGGTGGCATCAGAAAAGTTAAAGTTAATCAAGTTAGAGATTCTGATAATTGTATGCCTTCTGCATCCACAGGGCACTCCTATACTAGGGCTGATAACAGTGCAATTTCAATAGGCAATGGCTACAATAAAAATGATGACAATATTTCATTGGGTCCTACTTATAACAATGAAGATGAGAACTCTATTGCTATGGGGACCAGAATAAGCAAGAATGGTGACAATCTTCTTCCAATGGGCCACACTTTCATTAAAGGGGATGGGGGTTTTATGTTGATGGGCCACAACTATGGCAAGGGAGACGAAAGTATCTTATCTATGGGTCAGCCATTTGACAGGGAAGATGGACGTTTCATATCCATGGGTCAGTCATATGAAAAGGAACATGGCAACTTGATATCTCTGAATACCTCATATACCAAGGAGAATGAGAGCTTTATATCAATTGGTCCAACCTTTGGTAAATCAGGAGAAGCTTTCATAACTGTTGCTCCTTTAGATGTATCAACGGTTCCATACGATACAGGAGATTCTAGCTCTTTACCTGTAGGTCAAAACCACAATAAGGGTCAGAGCAGTACCATATCTTTTGGACCTTTTCATGATGACCCTGAACCAAATCCCTCTGGTGGAATCATTAGTAACTATGATCTGTTGATGGGCAACCAGAACTCGTCTCAAGATTTGGATAGCCAGAAGGATCTGACTGAGTTAAACTCTGAGCAACTTGTAAATAGCATCCCAAAACCTAATACTAAAACTGATTCCAACCTTAAGAACAAAGAGCCAAAGTCAACAAAGAAGGCTCCTTCTAACAATTTTCCTTCAAATGTCAAGAGTTTGTTGTCAACTGGTATTTTTGATGGTGTTCGGGTGAAATATGTTTCATGGTCACGCGAGAAAAATCTTCAAGGAACCATAAAAGGGACTGGGTACTTGTGTTCATGTAATGACTGTAACTCTAAGGAGTCGAAGCCTCTTAATGCATATGAGTTTGAGCGTCATGCTGGTGCCAAGACAAAACACCCTAACAATCACATATACTTCGAGAATGGAAAAACCATCTATGCTGTTGTTCAAGAGCTGAAAAACACTCCTCAGGAGATGCTTTTTGAGGCAATTCAGCAGGTGACTGGCTCCCTCATCAATCAAAAGAACTTTCGTATTTGGAAAGCTTCATATCAAGCTGCTACTCGGGAGCTGCAGCGTATCTATGGAAAGGATGAAGTGACCATACCATCATGA 1680 0.4054 MSFQHKSFWMPRDAGCLAEENVGYENSSRIEPKRSHQWFMDTGESEVFSNKKQAVEAVSDRPVSGVSHVNVSQWDTNSGFHSVTGQFSDRLFGSDVRNVNLVDKNMPSIGSGNLNMGRKDFGNQYGNDPSMGLSITIPDPSSCLNFGGIRKVKVNQVRDSDNCMPSASTGHSYTRADNSAISIGNGYNKNDDNISLGPTYNNEDENSIAMGTRISKNGDNLLPMGHTFIKGDGGFMLMGHNYGKGDESILSMGQPFDREDGRFISMGQSYEKEHGNLISLNTSYTKENESFISIGPTFGKSGEAFITVAPLDVSTVPYDTGDSSSLPVGQNHNKGQSSTISFGPFHDDPEPNPSGGIISNYDLLMGNQNSSQDLDSQKDLTELNSEQLVNSIPKPNTKTDSNLKNKEPKSTKKAPSNNFPSNVKSLLSTGIFDGVRVKYVSWSREKNLQGTIKGTGYLCSCNDCNSKESKPLNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFEAIQQVTGSLINQKNFRIWKASYQAATRELQRIYGKDEVTIPS* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2589 559 PANTHER N-LYSINE METHYLTRANSFERASE 1 559 - -
Lja1g2589 559 MobiDBLite consensus disorder prediction 321 359 - -
Lja1g2589 559 MobiDBLite consensus disorder prediction 321 343 - -
Lja1g2589 559 PANTHER AUTOIMMUNE REGULATOR 1 559 - -
Lja1g2589 559 MobiDBLite consensus disorder prediction 386 421 - -
Lja1g2589 559 Pfam Tify domain binding domain 450 507 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2589 Lja-Chr1 30296244 30300833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2589 409 540 PHD Transcription Factor Family AT3G53680 56.818 3.58e-41 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2589 - - gmx:100782217 940.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2589 1 30296244 30300833 Lja1g2589 1 30296244 30300833 ECH