Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2587 ATGTCCAGAAAACTTGAGGAATGTGCCATTGGAATTGACCTTGGCACAACATACTCATGCGTTGCAGTGTGGAATCAGAATCAGAACCGAGTAGAAATCATTCATAATGACCAAGGCAACAGAACAACACCTTCTGTTGTTGCTTTCACTGATGATCAAAGATTGATTGGTGATGCTGCTCAAAATCAAGCTGCTATCAATCCTGAGAACACTGTCTTCAATGCTAAGAGGTTAATTGGTAGGAAATACAGTGATCCCATCATTCAAAATTATATGAAGTTGTGGCCTTTCAAGGTCATTGCTGGTGTTGATGATAAACCCATGATCCTTGTTAAGTACAAGGGTCAAGAGAAGACCATTTCAGCTGAGGAAATCTCATCCATGGTTCTCACAAAGATGAAGGAGATTGCTGAGGTGTATTTGGAGTCACCAGTGAAGAATGTTGTTGTCACTGTGCCTGCTTATTTCAATGATTCTCAGCGAAAAGCCACCATAGATGCTGGTTCTATTGCTGGTCTCAATGTAATGCGGATAATCAATGAGCCAACAGCTGCAGCCATTGCATATGGCATTGATAAGAGAACCAACTGTGTTGGAGAAAGGAATGTCCTCGTATTTGACCTTGGTGGAGGTACTTTTGATGTGTCTCTCCTTACAATTAAGGACAAGGTCTACCAAGTTAAGGCCACTGGTGGAAACACTCACCTAGGAGGAGAGAACTTTGATAACAGAATGGTGAATCACTTTGTAGAAGAGTTCAAAAGGAAGAGCAAATTGGATATAAGTGGAGATCCTAAAGCCCTCAGGAGGTTGAGAACTGCTTGCGAGAGGGCCAAAAGGGTACTCTCATACACTTCAGTTACCACAATTGAGGTAGATGGTTTCTTTCAGGGCACTGACTTCTGTTCCTCAATCACTCGCGCAAGGTTTGAGGAACTTAACAATGACATGTTTAGAGAATGTTTGGAGATAGTAGATAGGTGTCTTCATGATGCTAAGATGGACAAGAGTAGTGTACATGATGTTGTCCTTAGCATCAACCCTGATGAGGCAGTCGCTTATGGTGCAGCTGTCCAGGCTGCTTTGTTGACTGAAGGCATTAAGAATGTTCCAAACTTGGTGTTGATGGATGTTACACCTTTATCTCTTGGTATACATAACAAAGGAGATATCATGAGTGTGGTGATTCCTAGGAACACTACAATTCCTGTCAAGAAGACAAAACAATACTTTACAGTTGAAGATAACCAATCCAGTGTTTTGATTGAGGTTTATGAGGGTGAGAGAACAAGAGCCAGTGATAACAATTTGCTGGGCTCTTTTACTCTTACTGGCATTCCTCCGGCTCCTCGCGGTCATCCTCATCATGTGTGCTTTGCTATCGATGAAGATGGTACCTTAACTGTTTCCGCTGAGGAAAAAACAACTGGCAATAAGAACAAGATTACCATAACCAAAGGCAAAGGAAAACTGTCAACAGAAGAAATTAAGAGATTGATTCAAGAGGCTGAGTATTACCAGGCTGATGATAAGAAGTTCCTTAAGAAGGCCACTGCAAGGAATGCTTTGGACAATTACACTTACAAGATGAAGAATGCTATGAAGGATTCTAATATTAAAGCTGAAAATTTGCTTGATGGTAACCAACAAGCAGAAGCCTGTGTGTTTGAGAACTGTCTGCACAAGATAAAGAACATTTTTGAACCAATTTTAGTCAAGAAGAAGCGAGGAAGAAATGATGAGGTGATTGTTTTGGATGACTGA 1764 0.411 MSRKLEECAIGIDLGTTYSCVAVWNQNQNRVEIIHNDQGNRTTPSVVAFTDDQRLIGDAAQNQAAINPENTVFNAKRLIGRKYSDPIIQNYMKLWPFKVIAGVDDKPMILVKYKGQEKTISAEEISSMVLTKMKEIAEVYLESPVKNVVVTVPAYFNDSQRKATIDAGSIAGLNVMRIINEPTAAAIAYGIDKRTNCVGERNVLVFDLGGGTFDVSLLTIKDKVYQVKATGGNTHLGGENFDNRMVNHFVEEFKRKSKLDISGDPKALRRLRTACERAKRVLSYTSVTTIEVDGFFQGTDFCSSITRARFEELNNDMFRECLEIVDRCLHDAKMDKSSVHDVVLSINPDEAVAYGAAVQAALLTEGIKNVPNLVLMDVTPLSLGIHNKGDIMSVVIPRNTTIPVKKTKQYFTVEDNQSSVLIEVYEGERTRASDNNLLGSFTLTGIPPAPRGHPHHVCFAIDEDGTLTVSAEEKTTGNKNKITITKGKGKLSTEEIKRLIQEAEYYQADDKKFLKKATARNALDNYTYKMKNAMKDSNIKAENLLDGNQQAEACVFENCLHKIKNIFEPILVKKKRGRNDEVIVLDD* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2587 587 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 519 577 IPR029048 -
Lja1g2587 587 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Lja1g2587 587 PANTHER HEAT SHOCK 70 KDA PROTEIN 345 574 - -
Lja1g2587 587 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 364 543 IPR029047 -
Lja1g2587 587 Gene3D - 73 128 - -
Lja1g2587 587 Gene3D Actin; Chain A, domain 4 237 320 - -
Lja1g2587 587 PRINTS 70kDa heat shock protein signature 38 50 - -
Lja1g2587 587 PRINTS 70kDa heat shock protein signature 346 366 - -
Lja1g2587 587 PRINTS 70kDa heat shock protein signature 60 68 - -
Lja1g2587 587 PRINTS 70kDa heat shock protein signature 8 21 - -
Lja1g2587 587 PRINTS 70kDa heat shock protein signature 148 168 - -
Lja1g2587 587 PRINTS 70kDa heat shock protein signature 372 391 - -
Lja1g2587 587 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Lja1g2587 587 Gene3D - 10 193 - -
Lja1g2587 587 Gene3D - 194 344 - -
Lja1g2587 587 PANTHER HEAT SHOCK 70 KDA PROTEIN 5 344 - -
Lja1g2587 587 SUPERFAMILY Actin-like ATPase domain 9 193 IPR043129 -
Lja1g2587 587 PANTHER HEAT SHOCK PROTEIN 70KDA 5 344 IPR013126 GO:0005524|GO:0140662
Lja1g2587 587 PANTHER HEAT SHOCK PROTEIN 70KDA 345 574 IPR013126 GO:0005524|GO:0140662
Lja1g2587 587 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 369 524 IPR029047 -
Lja1g2587 587 SUPERFAMILY Actin-like ATPase domain 200 363 IPR043129 -
Lja1g2587 587 Pfam Hsp70 protein 345 541 IPR013126 GO:0005524|GO:0140662
Lja1g2587 587 Pfam Hsp70 protein 9 344 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2587 Lja-Chr1 30264362 30266331 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2587 1 577 Calmodulin-binding Proteins AT3G12580 63.124 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2587 K03283 - gmx:102667578 821.617