Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2585 ATGGCTGCAAATGGTGAGAGAGTGGCAATAGGAATCGATCTAGGCACCACCTACTCGTGCGTTGCAGTGTGGAGGAACGATCAGGTTGAGGTCATTGTGAATGACCAAGGGAACAGAACAACACCCTCTTATGTTTCCTTCACCCAGAACCAAAGGATGATTGGTGATGCTGCTCTCAATAATGCTTCTACCAACCCAATCAACTCTGTCTTTGATGCAAAGCGGTTGATTGGTAGGAAATTCAGTGACCCCATGGTTCAAAGTGATAAGAAGCTGTGGCCATTCAAAGTTATTGCTGATGATAATGACAAACCAATCATTGTTGTTAATCACAATCACAAGGAAAAACGTTTTCCTGCTGAGGCAATCTCATCCATGGTCTTGGAAAAGATGCGTGAGATTTCTGAGGCTTACCTTGGATCAAAAGTGAAGGATGCTGTTATCACTGTGCCTGCTTACTTCAATGAGTCTCAGCGCCAAGCTACCAAAGATGCAGGTGCTATTGCAGGCCTCAATGTTATGCGAATAATCAATGAGCCTAGTGCTGCAGCGATTGCATATGGCGTTGACATGAAAGCTTGCATTCGTGGAAGGAGAAACGTTTTCATCTTTGATCTTGGTGGTGGTACTTTGGATGTGTCTCTTCTCACGTTTGAGATGGAAGATATCCAAGTTAAGACCATTGCTGGAGACACTCACCTTGGGGGAGAGGACTTTGATAATAGAATGGTGGACTATTTTGTGAAGGAATTCCAAAGAAAGAACAAAATGGACATCAGAGGAGACCCAAGAGCCCTTAGGAGGTTGAGATTTGCTTGTGAGAAAGCAAAGAGGACGCTCTCATGCAACACTCTGGCCACCATTGAGTTAGATTTCTTATATCAAGGTATTGATTTCTACTCATCAATAACTCGTGCAAAGTTTGAGGAACTCAACAAAGATTACTTTCAAAAGTGTATGGAGCTTGTGGAAAAGTGTGTAATAGATTCAAAGATGGACAAGAGCAATATTCATGATGTTGTCCTGGTTGGCGGCTCTTCTAGGATTCCTAAAGTGAGACAGCTACTGATGGACTTCTTTGGTAGGAAGGATCTATGCAATAGAATCAATCCTGATGAGGCTGTTGCGCATGGTGCTGCTGTTCATGCTTCTATATTGAGCGGTGAGTTCAGTGAGAAGGTTCAAAGCTTGTTATTGAGGGAAGTCACCCCTCTGTCCCTCGGGCTAGAGAAGCATGGGGGTATCATGGAAACAATAATTCCAAGGAATACCATGATTCCTACAACCATGGACCATGTATTCACTACACATTTTCATAACCAAACCAATATCTTGATTCATGTTTATGAGGGTGAGAGGCAAACAACTAGACACAACAACTTGCTAGGTAAGTTTGTACTGGAAATTCCTCCATATCCTCGAGGTGTTCCTCAAATCAAAGTATGCTTCCAAATTGATGAAGAAGGTATCTTACATGTCTCTGTCAAGGAAAAATCCAATAGAATTAACATGAAGGTTACAATAATAAATGACAAGGGAAGGTTGTCAAGGGCTGAAATCGAGAGGATGGTCAGAGAAAATGAGAAGAACAAGGCTGAAGATGAGAGGTACAAGAAGAAGGTAGAAGCAAAGAATGCATTGGAGAACTATGCATACAACATGAGGAATGCCATAAATGACGAGGACATTAGTTCGAAGCTTTCCCTAGAAGACAAGCAAAAGATCAATGATGCAATTGATTTGGTCTTGAAATGGCTTGGTATCAATGATGCTGCAGAACAAGATGATTTTGAGCGTTATAGTAAAGATCTTTCGAAGGCCTTTGATCCAATTATGTTGAAGATGATAAAGGATCTTTCCCCAACAGATAATGATGTGACGCCAAGTACTGTTGGAAATGATAAAATGAAACGCTGGTTACAAATATTGGCAAAGCATACTCTCCAGGCAGTGTATTCAACTCTTACTGGTGACATTATTGGGTTTGTTTGTACTGTGATTGGTGATATTCTGCCCTAG 2019 0.4156 MAANGERVAIGIDLGTTYSCVAVWRNDQVEVIVNDQGNRTTPSYVSFTQNQRMIGDAALNNASTNPINSVFDAKRLIGRKFSDPMVQSDKKLWPFKVIADDNDKPIIVVNHNHKEKRFPAEAISSMVLEKMREISEAYLGSKVKDAVITVPAYFNESQRQATKDAGAIAGLNVMRIINEPSAAAIAYGVDMKACIRGRRNVFIFDLGGGTLDVSLLTFEMEDIQVKTIAGDTHLGGEDFDNRMVDYFVKEFQRKNKMDIRGDPRALRRLRFACEKAKRTLSCNTLATIELDFLYQGIDFYSSITRAKFEELNKDYFQKCMELVEKCVIDSKMDKSNIHDVVLVGGSSRIPKVRQLLMDFFGRKDLCNRINPDEAVAHGAAVHASILSGEFSEKVQSLLLREVTPLSLGLEKHGGIMETIIPRNTMIPTTMDHVFTTHFHNQTNILIHVYEGERQTTRHNNLLGKFVLEIPPYPRGVPQIKVCFQIDEEGILHVSVKEKSNRINMKVTIINDKGRLSRAEIERMVRENEKNKAEDERYKKKVEAKNALENYAYNMRNAINDEDISSKLSLEDKQKINDAIDLVLKWLGINDAAEQDDFERYSKDLSKAFDPIMLKMIKDLSPTDNDVTPSTVGNDKMKRWLQILAKHTLQAVYSTLTGDIIGFVCTVIGDILP* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2585 672 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Lja1g2585 672 PRINTS 70kDa heat shock protein signature 8 21 - -
Lja1g2585 672 PRINTS 70kDa heat shock protein signature 146 166 - -
Lja1g2585 672 PRINTS 70kDa heat shock protein signature 476 492 - -
Lja1g2585 672 PRINTS 70kDa heat shock protein signature 36 48 - -
Lja1g2585 672 PRINTS 70kDa heat shock protein signature 209 219 - -
Lja1g2585 672 PRINTS 70kDa heat shock protein signature 369 389 - -
Lja1g2585 672 PRINTS 70kDa heat shock protein signature 58 66 - -
Lja1g2585 672 PRINTS 70kDa heat shock protein signature 337 353 - -
Lja1g2585 672 PRINTS 70kDa heat shock protein signature 396 415 - -
Lja1g2585 672 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Lja1g2585 672 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 548 IPR029047 -
Lja1g2585 672 Gene3D - 10 383 - -
Lja1g2585 672 PANTHER HEAT SHOCK PROTEIN 70KDA 1 627 IPR013126 GO:0005524|GO:0140662
Lja1g2585 672 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 627 - -
Lja1g2585 672 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 543 IPR029047 -
Lja1g2585 672 SUPERFAMILY Actin-like ATPase domain 7 191 IPR043129 -
Lja1g2585 672 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Lja1g2585 672 Gene3D - 71 126 - -
Lja1g2585 672 Gene3D Actin; Chain A, domain 4 235 318 - -
Lja1g2585 672 Gene3D - 192 366 - -
Lja1g2585 672 SUPERFAMILY Actin-like ATPase domain 197 388 IPR043129 -
Lja1g2585 672 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 542 619 IPR029048 -
Lja1g2585 672 Gene3D - 544 637 IPR029048 -
Lja1g2585 672 Pfam Hsp70 protein 9 615 IPR013126 GO:0005524|GO:0140662
Lja1g2585 672 Coils Coil 515 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2585 Lja-Chr1 30253388 30256317 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2585 1 621 Calmodulin-binding Proteins AT3G12580 67.363 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2585 K03283 - gmx:100798636 910.983