Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2583 ATGAACGACCTCACTGGTCATTTTGATAGCAATGGCTTAAACATGGGGTATGGAGTAATGAACAATGACAACCAATTGGACAAAGGAGTCTATTCACAGCCTAGCCAGTCTCAGTCTCAGATTTATAACAACAATTATCAACCAGGCAGTAATCTATGTGCAATTTCAAGCAGTAGAGATATTTCTCAGCAATCACTGTTACATGACAAGGACCTTTCAGTTTCTCAATATGAAGGAGTACTTAAATGCCAGAAAACGTCCATCCGAGTATGTTGCAATGTTGACACCATGCCCATGTTGAAAAAGATGAAAACCAATCTGAAAAGCAAGATCACATTTTTCGAAACAAATTGGCATCAAGTAAGAGAAGCTTCAGAGTTAACCCCTAAGGTCAAAGTAAGAAAATTGCATGTCCCCATGAGGAGAAATCAGAAGCTCAGTGATAAAGTAACAACCCTACAGAAGCTGGTTTCGCCTTTTGGCAAGGTGAATCATGATTGCAACCCTCAAATGAACAAAAAAAGTGACATTTTTTTTCTGGCTATCCTGCAGACTGGCACTGCCTCAGTTCTTCAGGAGGGCTCTCTTCATATCAAATTTCTTCATGCACAAATACAGGCTTTGATTCAGATGTTGAGTTTCTCTTACAATAGGACTGTTAAAGCTCATTATACTCAAGTGTCACATCAGGAATGTGGGGACAAATTACAGGTTGACCTAAGGAACAGGGGACTTTTGGTTCCCATATCAATCACACACAAAGTAACAATGGAAGAGCAGATTCATCATACCTCTGCCTCAAGAATTATGTCGAGCTGA 819 0.398 MNDLTGHFDSNGLNMGYGVMNNDNQLDKGVYSQPSQSQSQIYNNNYQPGSNLCAISSSRDISQQSLLHDKDLSVSQYEGVLKCQKTSIRVCCNVDTMPMLKKMKTNLKSKITFFETNWHQVREASELTPKVKVRKLHVPMRRNQKLSDKVTTLQKLVSPFGKVNHDCNPQMNKKSDIFFLAILQTGTASVLQEGSLHIKFLHAQIQALIQMLSFSYNRTVKAHYTQVSHQECGDKLQVDLRNRGLLVPISITHKVTMEEQIHHTSASRIMSS* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2583 272 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 24 258 - -
Lja1g2583 272 CDD bHLH_AtbHLH_like 141 208 IPR045239 -
Lja1g2583 272 PANTHER TRANSCRIPTION FACTOR BHLH112 24 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2583 Lja-Chr1 30238388 30241093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2583 129 250 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 38.400 4.20e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2583 - - ccaj:109812405 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2583 1 30238388 30241093 Lja1g2583 1 30238388 30241093 ECH