Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2582 ATGCGTATCATCAATGAACCCACTGCTGCTGCAATTGCCTATGGCCTTGACAAGATACCTACCAGTGTTGGTGAGAAGAATGTTTTGATTTTTGATCTTGGTGGTGGTACTTTTGATGTCTCTCTTCTCACCATTGAAGAGGGTATCTTTGAGGTTAAGGCCACTGCTGGAGACACCCATCTTGGAGGTGCAGACTTTGACAACAGAATGGTGAACCATTTTGTTCAGGAGTTCAAGAGGAAGAACAAGAAGGACATTAGTGGAAACCCAAGGGCTCTAAGGAGGTTGAGAACAGCCTGTGAAAAGGCAAAGAGGACTCTCTCATCCACCGCACAGACCACAATTGAGATTGATTTATTGTTTGAAGGAGTTGATTTTTACACCATAATCACTCGTGCTAGATTTGAGGAGCTCAACGTGGACCTCTTCAGGAAGTGTATGGAGCCAGTTGAGAAGTGTTTGAGGGATGCCAAGATGGACAAGAACAGTGTCCATGATGTTGTTCTTGTTGGTGGTTCTACCAGGATCCCCAAGGTGCAGTCTCTATTGCAGGATTTCTTCAACGGGAAGGAGCTTTGCAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGAGCTGCTGTTCAGGCTGCTATCTTGAGTGGTGAGGGTAATGAGAAGGTTCAGGATCTTTTGTTGTTGGATGTTACTCCTCTTTCTCTTGGTTTGGAAACTGCTGGTGGTGTTATGACTGTTCTCATTCCTAGGAACACAACAATTCCAACCAAGAAGGAGCAAGTTTTCTCAACTTACTTGGACAACCAACCTAGTGTCTTGATCCAGGTGTACGAGGGTGAGAGGATCAGGACCAGAGATAACAACTTGTTGGGTAAATTTGAGCTTTCCGGCATTCCTCCAGCTCCAAGGGGTGTGCCTCAGATCACTGTTTACTTCGATATTGATCAGAATGGTATTTTGAATATCTATGCTGAGGACAAGACTACAGGGCAGAAGAACAAGATCACTATCACCAACGGCATGGGCAGGCTCTCAACGGAGGAGATTGGAAAGATGGTGCAGGAGGCAGAGAAGTACAAGGCTGAAGATGAGGAGCACAAGAAGAAGGTTGATGCAAAGAATGCCTTGGAAAACTACGCTTACAACATGAGGAACACTATCAAGGATGAGAAGATTGGGTCCAAGCATTCTACAGAAGATGCTCCAGATCCCGCTATTGGAATCGACCTCGGAACCACTTACTCCTGCGTCGGAGTGTGGCAGCACGGCTGTGTCGAAATCATCCCCAACGACCAGGGCAACTGGACCACCCCCTCTTATGTCGCTTTCACCGATTCCGAGTTCATGATTAGTGATGCTGCCAAGAACCAGGCCACCATGAACCCCATCAACACCGTCTTTGATGCGAATCGTTTGATTGGAAGGAAATTCTCTGATGCTTCCGTTCAGAGTGACATGAAACTATGGCCGTTCAAGGTCATTTCTGGTCCTGGCGACAAGCCCTTGATTGTTGTCAACTACATGAAGGAGGAGAAGCAGTTCACTGCCGAGGAGATTTCCTCCATCGTCCTCTTCAAGATGCGTGAGATCGCAGAGGCTTACCTCGGTTCCACTGTGAAGAACGTCGTTGTCACCGTCCCAACATACTTCAATTATTCTCAGCGCCAGGCCACAAAGGACGCCAGTGTCATCGCTGGCCTTAACGTCATTCGTATTATCGACGAACACACCGCTACTGCCATTGCCTATGGTCTTGACAAGAAGGTCAGCGGTGATGCTAAGAAGAACGTGATGATTTTTGACCTTGGTGGTGGTAATTTGGATGTGTCCCTTCTAACCATCGATGCGGGTTTCTTTCAAGTTCAGGCCACTGTCAGAGACTCCTGTTTTGGAGGTGAAAACTTTACTAAAAGATTGTTGGACCATTTTTCATGGGAATTCAAGAGAAGGCAGAAGAAGGACATTAGTGGGAACTCGAGGGCTCTAACAAAATTGAAGACTGCATGTGTAAAAGCAAAGAAGAGTCTCTCATCTAGCATCAGGACTACCATTGAGATCGAGTCACTGTATGAAGGTGTTGATTTTTACTCAACAATCACTCGTGCTAGATTTGAGGAGCTCAACATGGACCTCTTCAGGAGGTGCTTGGAGACAGTTGAGAAGTGTTTGAGAGAAGCCAAGATGGACAAGAATAGTGTCCATGATGTTGTCCTTGTTGGTGGGTCTACCAGGATCCCCAAGTTGCAACAACTGCTGCAAGATTTCTTCAACGGGAAGGAGCTTTGCAAGAGCATCAACCCTTGCCAGACTGTTGCTTATGGAGCTGCTGTTCAGGCTGCTATCTTGAGTGCTGAGGACAAGAATACAGGGAAGAAGAACAAGATCAGTACGATTGCAAATGACAAGAAGGAGATTGAGAAGATGGTGCAGGAGGCCGGGAAGTGTAATTCTACCGAAGATGCACCAGATCAACACTTGAAGGCACAAGTAGAACATGACACCTGCCATCAGATTACAGTACCACCCCCAAGTTTAAGTTTACAGTCCTTCCCTTCCGGAAACTTCGGCTATTATTTCAAATCTACCAAAAAGGCTTCGGAGGAGCTTTTGGAGGCACTAAAAGATGATAGCTGCTATGTAATTGGATTGCACGGAAAGAGGGGCTCTGGTAAAACTGCATTAGTGAGAGCTGAGATGCACAATTATAAAAAGATTTTGGCTTAA 2721 0.4616 MRIINEPTAAAIAYGLDKIPTSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGADFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACEKAKRTLSSTAQTTIEIDLLFEGVDFYTIITRARFEELNVDLFRKCMEPVEKCLRDAKMDKNSVHDVVLVGGSTRIPKVQSLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYLDNQPSVLIQVYEGERIRTRDNNLLGKFELSGIPPAPRGVPQITVYFDIDQNGILNIYAEDKTTGQKNKITITNGMGRLSTEEIGKMVQEAEKYKAEDEEHKKKVDAKNALENYAYNMRNTIKDEKIGSKHSTEDAPDPAIGIDLGTTYSCVGVWQHGCVEIIPNDQGNWTTPSYVAFTDSEFMISDAAKNQATMNPINTVFDANRLIGRKFSDASVQSDMKLWPFKVISGPGDKPLIVVNYMKEEKQFTAEEISSIVLFKMREIAEAYLGSTVKNVVVTVPTYFNYSQRQATKDASVIAGLNVIRIIDEHTATAIAYGLDKKVSGDAKKNVMIFDLGGGNLDVSLLTIDAGFFQVQATVRDSCFGGENFTKRLLDHFSWEFKRRQKKDISGNSRALTKLKTACVKAKKSLSSSIRTTIEIESLYEGVDFYSTITRARFEELNMDLFRRCLETVEKCLREAKMDKNSVHDVVLVGGSTRIPKLQQLLQDFFNGKELCKSINPCQTVAYGAAVQAAILSAEDKNTGKKNKISTIANDKKEIEKMVQEAGKCNSTEDAPDQHLKAQVEHDTCHQITVPPPSLSLQSFPSGNFGYYFKSTKKASEELLEALKDDSCYVIGLHGKRGSGKTALVRAEMHNYKKILA* 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2582 906 Gene3D - 466 521 - -
Lja1g2582 906 PANTHER HEAT SHOCK PROTEIN 70KDA 782 824 IPR013126 GO:0005524|GO:0140662
Lja1g2582 906 PANTHER HEAT SHOCK PROTEIN 70KDA 1 399 IPR013126 GO:0005524|GO:0140662
Lja1g2582 906 SUPERFAMILY Actin-like ATPase domain 25 215 IPR043129 -
Lja1g2582 906 Pfam Hsp70 protein 1 393 IPR013126 GO:0005524|GO:0140662
Lja1g2582 906 Pfam Hsp70 protein 404 785 IPR013126 GO:0005524|GO:0140662
Lja1g2582 906 Gene3D - 21 193 - -
Lja1g2582 906 Gene3D - 1 211 - -
Lja1g2582 906 PRINTS 70kDa heat shock protein signature 764 784 - -
Lja1g2582 906 PRINTS 70kDa heat shock protein signature 403 416 - -
Lja1g2582 906 PRINTS 70kDa heat shock protein signature 604 614 - -
Lja1g2582 906 PRINTS 70kDa heat shock protein signature 732 748 - -
Lja1g2582 906 PRINTS 70kDa heat shock protein signature 541 561 - -
Lja1g2582 906 PRINTS 70kDa heat shock protein signature 431 443 - -
Lja1g2582 906 PRINTS 70kDa heat shock protein signature 453 461 - -
Lja1g2582 906 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 218 371 IPR029047 -
Lja1g2582 906 Gene3D - 372 402 IPR029048 -
Lja1g2582 906 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 370 399 IPR029048 -
Lja1g2582 906 SUPERFAMILY Actin-like ATPase domain 593 782 IPR043129 -
Lja1g2582 906 ProSitePatterns Heat shock hsp70 proteins family signature 3. 167 181 IPR018181 -
Lja1g2582 906 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 862 901 IPR027417 -
Lja1g2582 906 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 402 784 - -
Lja1g2582 906 SUPERFAMILY Actin-like ATPase domain 403 586 IPR043129 -
Lja1g2582 906 PANTHER HEAT SHOCK PROTEIN 70KDA 402 784 IPR013126 GO:0005524|GO:0140662
Lja1g2582 906 ProSitePatterns Heat shock hsp70 proteins family signature 2. 30 43 IPR018181 -
Lja1g2582 906 ProSitePatterns Heat shock hsp70 proteins family signature 1. 407 414 IPR018181 -
Lja1g2582 906 Gene3D - 405 779 - -
Lja1g2582 906 Gene3D - 587 761 - -
Lja1g2582 906 ProSitePatterns Heat shock hsp70 proteins family signature 3. 735 749 IPR018181 -
Lja1g2582 906 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 782 824 - -
Lja1g2582 906 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 399 - -
Lja1g2582 906 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 219 376 IPR029047 -
Lja1g2582 906 Gene3D Actin; Chain A, domain 4 630 713 - -
Lja1g2582 906 Gene3D Actin; Chain A, domain 4 63 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2582 Lja-Chr1 30219757 30223085 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2582 403 784 Calmodulin-binding Proteins AT3G12580 75.916 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2582 K03283 - hbr:110636145 1183.7