Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2572 ATGGTGCAGGAGGCGGAGAAGTACAAGGTTGAGGATGAGGAGCACAAGAAGAAGGTCGATGCCAAGAATGCCTTGGGGAAGAAGGTGCAAGAGGCGGAGAAGTACAAGGTTGGGGATGAGAAGCACAAGAACATGGTCCCTGCCAAGAATGGCTTAAGGAAGAAGGTGCAGGAGGCGGAGAAGTACAATTCTGCAAAAGATGTTCCAGAGCATGGTACTTCTCATACAACACTAAGCCCAAGTTTACACTCCTTCCCTTCTGGAAACTTTGGTTATTATTTCAACTCTACGAAAAATGCTTCAAAGAAAATTATAGAGGCACTAAAAGATGAAAGTTGTTGCGTAATTGGATTGCATGGAAAGAAAGGCTCTGGTAAAACATCTTTAGTGAAAGTTGAGATAGATGAGTATGAAAAGATTTTTTGTAGAGTTATATTTCCCACAGTTTCCATTAACCAAGATATCAAGAGCATTCAGGAGGGAATTGCTAGCTCATTGAACGTGCATTTTGAAAGTGATGACAGTGATGGCATGAGAGCAATGAAAATAATTTTGGCATTAGAAAGGAGGGATAGAACTACTCTGGTCATCTTGGACAATTTTCCGACAAAGTATCAACCGCAGGAATTAGGCATACCTTATAATAGCAAACAATGTAAAGTTCTTTTAACCACACGTGATAAGGCAGACTGTGTCTTGATGAGATGTGATTGTTCCATTTCTCTTGATCCCTTATCTAATCTTGAAGCTTTGACACTGCTGCAAAAACTTTCTGGTATTAACGCCCAATCTGATCTATTTGAAGTGGCACAGGAAGTTGCTTCTAAATGCAATGGCTTACCTGGATTAGTTGAAAAGGAAGATGGTCTATGTGGTGGACTGCGCGAAACTTCTCTCTTCTCTTGA 906 0.4084 MVQEAEKYKVEDEEHKKKVDAKNALGKKVQEAEKYKVGDEKHKNMVPAKNGLRKKVQEAEKYNSAKDVPEHGTSHTTLSPSLHSFPSGNFGYYFNSTKNASKKIIEALKDESCCVIGLHGKKGSGKTSLVKVEIDEYEKIFCRVIFPTVSINQDIKSIQEGIASSLNVHFESDDSDGMRAMKIILALERRDRTTLVILDNFPTKYQPQELGIPYNSKQCKVLLTTRDKADCVLMRCDCSISLDPLSNLEALTLLQKLSGINAQSDLFEVAQEVASKCNGLPGLVEKEDGLCGGLRETSLFS* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2572 301 MobiDBLite consensus disorder prediction 54 80 - -
Lja1g2572 301 PANTHER DISEASE RESISTANCE PROTEIN RP 48 281 IPR044974 GO:0006952
Lja1g2572 301 PANTHER DISEASE RESISTANCE PROTEIN RFL1-RELATED 48 281 - -
Lja1g2572 301 Gene3D - 90 238 IPR027417 -
Lja1g2572 301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 284 IPR027417 -
Lja1g2572 301 Pfam NB-ARC domain 101 282 IPR002182 GO:0043531
Lja1g2572 301 Gene3D - 1 27 IPR029048 -
Lja1g2572 301 MobiDBLite consensus disorder prediction 1 22 - -
Lja1g2572 301 MobiDBLite consensus disorder prediction 54 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2572 Lja-Chr1 30131679 30133783 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2572 1 25 Calmodulin-binding Proteins AT3G12580 96.000 1.23e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2572 - K13459 lja:Lj0g3v0120799.1 304.293