Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja1g2553 | ATGACAGAAAAATATGCAGCATGCGCCATAGGAATTGACCTTGGTACCACTTATTCATGCGTTGGAGTGTGGCAGGAGCAACAAGATAGAGTGGAGATTATCCACAATGACCAAGGCAACAATACCACACCTTCTTTTGTTGCCTTCACAGATAAACAAAGGTTGATTGGGGAAGCTGCTAAAAATCAAGCTGCTACCAATCCAGACAACACTGTTTTTGATGCTAAGAGGTTAATTGGAAGGAAATTTAGTGACCCCATTATTCAAAAAGATATTTTATTGTGGCCCTTCAAAGTCATTGGCGATGTTAATGACAAACCCATGATTGTCGTTAGCTACAAAGGCCAAGAGAAGGAACTTTCAGCGGAGGAAATTTCATCTATGGTTCTCATAAAGATGAAGGAGATTGCAGAGGCATTTTTGGAGGCACCTGTGAAGAATGCAGTTGTCACTGTTCCTGCTTATTTTAATGACTCGCAGAGAAAAGCCACCAAGGATGCCGGTGCCATTGCTGGCCTCAATGTTATTCGTATAATCAATGAACCAACTGCTGCAGCTATTGCATATGGCCTTGAAAACAGAACACGTTGTGTTGGAGAAAGAAATGTTTTTGTGTTTGACCTTGGTGGGGGTACTTTTGATGCCACTTCTGGAAACACTCACCTTGGGGGAGAGGACTTTGATAATAGAATGGTAGAATATTTGGCAAGGGAGTTCAAGAAGAAGCACAAAATGGACATCAAGGGGAATGCAAAAGCTCTGAGGAAGTTGAGAAAAGCATGTGAGAGGGCGAAAAGGACACTCAGTTTTGCTGTTGATACCACCATTGAGGTAGACGCTTTATTCGAGGGAATAGACTTTAGTTTTCCAATCTCTCGTGGGAGGTTTGAGAAGATCAACATGGATCTATTTGAGGAGTGTATGGAGACTGTGGAGAGGTGTCTTACTGATGCTAAGATGAAGAAGAGTAGTGTGGATGATGTCGTTCTTATTGGTGGTTCTTCTAGGATTCCCAAAGTGCAGCAGCTATTACAAGATTTCTTCAATGGGATGGAATTGTGTAGGAGCATTAACCCTGATGAGGCTGTTGCATGTGGTGCAGCCGTCCAGGCTGCTTTGTTGAGCGAGGGCGTTAAGAATGTTCCAAAGATAGCTCTTTCGGATGTTACACCTCTTTCACTAGGTATTGCAGAAGAAGGAGATCTCATGAGTGTTGTGATTCCTAGGAACACTACCATTCCTGTGAAGAAAACAGAAGAATACGTTACAATTTATGATGACCAATCCAGCCTTTTAGTCGAGGTTTATGAGGGTGAGAGATCAAGAGCCAGTTATAACAATTTGTTGGGTTATTTTTATCTTACTGGCATTACTCCCGCTCCTCGTGGTCATCCTCATGATGTATGCTTCGCTATTGATGAAAATGGTATCCTCACTGTTTCTGCTAAGGAAAAAACTAATGGCAATATGAATGAGATTACCATAACCAATGACACAGGAAGACTGTCACCCGAAAAAATCAGAAGATTGATTGAAGAAGCTGAGAATTACAAGGCAGAAGATATGAAGTTCAAAAAGAAGGTTAAAGTAATGAAGGACATGGAGGATTACCTTTATGATATGAAAAAGCTTGTTACGGATAAGGGTGTCAGTTCTAAGCTTTCTACAGTGGACCAAGTTAAGATCAATTCAGCTATTGTAAAGGGAAAAATATTGCTTGGTGGTGACCAGCAGGAAGATACGTTTGTATTTGTGAACATGTTAAGAGAGCTTAAGAGCATATTTGAACCTGCAATGGCCAAGATTAATAATAGTTGGACTAATGAGGAAAGTGATAATGATTGA | 1845 | 0.4092 | MTEKYAACAIGIDLGTTYSCVGVWQEQQDRVEIIHNDQGNNTTPSFVAFTDKQRLIGEAAKNQAATNPDNTVFDAKRLIGRKFSDPIIQKDILLWPFKVIGDVNDKPMIVVSYKGQEKELSAEEISSMVLIKMKEIAEAFLEAPVKNAVVTVPAYFNDSQRKATKDAGAIAGLNVIRIINEPTAAAIAYGLENRTRCVGERNVFVFDLGGGTFDATSGNTHLGGEDFDNRMVEYLAREFKKKHKMDIKGNAKALRKLRKACERAKRTLSFAVDTTIEVDALFEGIDFSFPISRGRFEKINMDLFEECMETVERCLTDAKMKKSSVDDVVLIGGSSRIPKVQQLLQDFFNGMELCRSINPDEAVACGAAVQAALLSEGVKNVPKIALSDVTPLSLGIAEEGDLMSVVIPRNTTIPVKKTEEYVTIYDDQSSLLVEVYEGERSRASYNNLLGYFYLTGITPAPRGHPHDVCFAIDENGILTVSAKEKTNGNMNEITITNDTGRLSPEKIRRLIEEAENYKAEDMKFKKKVKVMKDMEDYLYDMKKLVTDKGVSSKLSTVDQVKINSAIVKGKILLGGDQQEDTFVFVNMLRELKSIFEPAMAKINNSWTNEESDND* | 615 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja1g2553 | 614 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 502 | 601 | IPR029048 | - | |
Lja1g2553 | 614 | Gene3D | - | 194 | 354 | - | - | |
Lja1g2553 | 614 | Gene3D | Actin; Chain A, domain 4 | 223 | 306 | - | - | |
Lja1g2553 | 614 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 12 | 19 | IPR018181 | - | |
Lja1g2553 | 614 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 379 | 531 | IPR029047 | - | |
Lja1g2553 | 614 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 328 | 342 | IPR018181 | - | |
Lja1g2553 | 614 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 6 | 603 | IPR013126 | GO:0005524|GO:0140662 | |
Lja1g2553 | 614 | SUPERFAMILY | Actin-like ATPase domain | 200 | 375 | IPR043129 | - | |
Lja1g2553 | 614 | SUPERFAMILY | Actin-like ATPase domain | 9 | 192 | IPR043129 | - | |
Lja1g2553 | 614 | Pfam | Hsp70 protein | 9 | 596 | IPR013126 | GO:0005524|GO:0140662 | |
Lja1g2553 | 614 | PANTHER | HEAT SHOCK 70 KDA PROTEIN | 6 | 603 | - | - | |
Lja1g2553 | 614 | Gene3D | - | 532 | 605 | IPR029048 | - | |
Lja1g2553 | 614 | Gene3D | - | 10 | 372 | - | - | |
Lja1g2553 | 614 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 380 | 529 | IPR029047 | - | |
Lja1g2553 | 614 | Gene3D | - | 73 | 128 | - | - | |
Lja1g2553 | 614 | PRINTS | 70kDa heat shock protein signature | 8 | 21 | - | - | |
Lja1g2553 | 614 | PRINTS | 70kDa heat shock protein signature | 463 | 479 | - | - | |
Lja1g2553 | 614 | PRINTS | 70kDa heat shock protein signature | 357 | 377 | - | - | |
Lja1g2553 | 614 | PRINTS | 70kDa heat shock protein signature | 383 | 402 | - | - | |
Lja1g2553 | 614 | PRINTS | 70kDa heat shock protein signature | 211 | 221 | - | - | |
Lja1g2553 | 614 | PRINTS | 70kDa heat shock protein signature | 38 | 50 | - | - | |
Lja1g2553 | 614 | PRINTS | 70kDa heat shock protein signature | 325 | 341 | - | - | |
Lja1g2553 | 614 | PRINTS | 70kDa heat shock protein signature | 148 | 168 | - | - | |
Lja1g2553 | 614 | PRINTS | 70kDa heat shock protein signature | 60 | 68 | - | - | |
Lja1g2553 | 614 | Coils | Coil | 507 | 527 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja1g2553 | Lja-Chr1 | 29792852 | 29794820 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja1g2553 | 1 | 602 | Calmodulin-binding Proteins | AT3G12580 | 63.754 | 0.0 | 791 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja1g2553 | K03283 | - | gmx:102667572 | 835.099 |