Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2547 ATGATTTCACTCTCCCTCAGCCTCTCCAGATCACTCAGTTCTCAAGGATTAATGGCCAACAAATATGAGGGACCTGCAATAGGAATTGATTTAGGCACCACCTACTCATGTGTTGCTATATGGCAAGGACAGAACAATCGAGCTGAGATCATTCCCAATGAACAAGGAAACAGAACCACACCTTCCTGTGTTGCTTTCACTGATACCCAAAGATTGATTGGTGATGGTGCAAAAAATCAGGCTGCAATGAATCCATCAAACACTGTCTTTGATGCTAAGAGGTTGATTGGAAGGAAATATCGTGACTCAGTTGTTCAGGTTGATGTCAAACTCTGGCCCTTCAAGGTCATTGCTGGAACTGATGGCAAACCCACCATTGTTGTTAAGTATAAGGGTAAGGAAAAACGCCTTGTTCCTGAGGAGATCTCATCCATGGTTCTCTCAAAGATGAAGGAGACTGCTGAGGCATTTTTGGTGTCACCTGTGAAGAATGCAGTCATCACTGTGCCTGCTTATTTCAATGACTCTCAGAGAAAAGCCACCAAGGATGCTGGTGCCATTGCTGGCCTCAATGTTATGCGGATAATCAATGAACCAACCGCTGCAGGTCTCGCATATGGCCTTCAGAAGAAATCCAGTTTTGCTGGAAATCGAAATATGTTCATCTTTGATCTCGGTGGAGGCACTTTTGATGTGTCTATTCTCACTATAAAAGATGATAACTTCGAGGTGAAGGCCATTGCTGGTGACACTCACCTTGGAGGAGAGGACTTCGATAACAGAATGGTGGACCATTTTGTTAAGGAGTTTAAGAGGAAGCACAAGAAGGACATTAGTGGGAGCCCAAGAGCCTTAAGGAGGTTGAGAAATGCGTGTGAGAAAGCAAAAAGGACACTCTCATTCGCTGTAGATACCACCATTGAGGTAGATGCTTTATTTGAGAACACTGACTTGTGTTCAACAATTACTCGCATCAGATTTGAGGAACTGAACATTGATCTCTTTAAGAAGTGTATGGAGATAGTTGAGAGGTGTCTTGAAGACTCTAAGATGGACAAGAGTGACATAGATGATGTTGTTCTTGTTGGTGGTTCTTCTAGGATTCCCAAAGTGCAGCAGCTATTGCAGGATTTTTTCAATGGGAAGGAACTATGCAAGGGCATCTGTCCTGATGAAGCTGTTGCTTATGGTGCAGCTGTGCAAGCTGCTTTGTTGACTGATGGTGTTACGAATGTTCCAAACTTGGTATTGATGGATGTTTCACCACTGTCTCTTGGTATATTTACAAAAGGAAATCTCATGAGTATAGTGGTTCCAAGGAATACCACTATTCCTACAAAGAAGAAACAAAGATACATCACAACTGAAGATAACCAATCCCGTGTCTTGTTTGAGGTTTATGAGGGTGAGAGGACAAGAGCCACTAATAACAATTTGTTAGGCTCTTTTATTCTTTCTGGCCTACCTCGTGCTCCTCGTGGCCTACCCTTAGATGTGTGCTTTTCTATAGACGAAAATGGCATTCTAACTGTTTCTGCTGAGGAAAAAACCACTGGTAGTAGGAATGAGATTACCATTACCAATGGCAAAGGAAGACTATCTTCTCAACAAATTAAGAGAATGATTAAAGAAGCTGATAATTATAAGACTGAAGATTTGAAGTTCAAGAAGAAAGTCGAAGCGGTAAATGCTGTAGATTATTACCTTTACAACATGAAAAAGCTTATGAGGGATGAGAGTGTCAGTTCTAAGCTTCCCCCAGTGGTCCAAGTTAAGATCAGTTCAGCTATCGTAAAGGGTGAAAATTTGCTTGATGGTGGCCAGAAGCAAGAGGCGTTTGTGTTTGTTGACTTATTAAGGGAGCTTAAGAGCATATTTGAACCTGCAATGGCCAAGATCAACAACGGTTGCACTCGTGAGGAGAGTGATGAGGATTATGGAAGCACTACTGGGCCAGCCGAATCGATTGCTACTTCGACCAGGCGCAAGTTGAAGAACAAGCTGAGTTGGTTTAATAATTTTGCTTGA 2028 0.4231 MISLSLSLSRSLSSQGLMANKYEGPAIGIDLGTTYSCVAIWQGQNNRAEIIPNEQGNRTTPSCVAFTDTQRLIGDGAKNQAAMNPSNTVFDAKRLIGRKYRDSVVQVDVKLWPFKVIAGTDGKPTIVVKYKGKEKRLVPEEISSMVLSKMKETAEAFLVSPVKNAVITVPAYFNDSQRKATKDAGAIAGLNVMRIINEPTAAGLAYGLQKKSSFAGNRNMFIFDLGGGTFDVSILTIKDDNFEVKAIAGDTHLGGEDFDNRMVDHFVKEFKRKHKKDISGSPRALRRLRNACEKAKRTLSFAVDTTIEVDALFENTDLCSTITRIRFEELNIDLFKKCMEIVERCLEDSKMDKSDIDDVVLVGGSSRIPKVQQLLQDFFNGKELCKGICPDEAVAYGAAVQAALLTDGVTNVPNLVLMDVSPLSLGIFTKGNLMSIVVPRNTTIPTKKKQRYITTEDNQSRVLFEVYEGERTRATNNNLLGSFILSGLPRAPRGLPLDVCFSIDENGILTVSAEEKTTGSRNEITITNGKGRLSSQQIKRMIKEADNYKTEDLKFKKKVEAVNAVDYYLYNMKKLMRDESVSSKLPPVVQVKISSAIVKGENLLDGGQKQEAFVFVDLLRELKSIFEPAMAKINNGCTREESDEDYGSTTGPAESIATSTRRKLKNKLSWFNNFA* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2547 675 Gene3D - 211 385 - -
Lja1g2547 675 PANTHER HEAT SHOCK 70 KDA PROTEIN 21 634 - -
Lja1g2547 675 PANTHER HEAT SHOCK PROTEIN 70KDA 21 634 IPR013126 GO:0005524|GO:0140662
Lja1g2547 675 ProSitePatterns Heat shock hsp70 proteins family signature 3. 359 373 IPR018181 -
Lja1g2547 675 Gene3D - 90 145 - -
Lja1g2547 675 Gene3D - 27 402 - -
Lja1g2547 675 Gene3D Actin; Chain A, domain 4 254 337 - -
Lja1g2547 675 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 403 531 IPR029047 -
Lja1g2547 675 PRINTS 70kDa heat shock protein signature 165 185 - -
Lja1g2547 675 PRINTS 70kDa heat shock protein signature 25 38 - -
Lja1g2547 675 PRINTS 70kDa heat shock protein signature 388 408 - -
Lja1g2547 675 PRINTS 70kDa heat shock protein signature 77 85 - -
Lja1g2547 675 PRINTS 70kDa heat shock protein signature 356 372 - -
Lja1g2547 675 PRINTS 70kDa heat shock protein signature 228 238 - -
Lja1g2547 675 PRINTS 70kDa heat shock protein signature 55 67 - -
Lja1g2547 675 PRINTS 70kDa heat shock protein signature 414 433 - -
Lja1g2547 675 PRINTS 70kDa heat shock protein signature 494 510 - -
Lja1g2547 675 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 560 637 IPR029048 -
Lja1g2547 675 SUPERFAMILY Actin-like ATPase domain 216 406 IPR043129 -
Lja1g2547 675 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 411 566 IPR029047 -
Lja1g2547 675 Coils Coil 285 305 - -
Lja1g2547 675 ProSitePatterns Heat shock hsp70 proteins family signature 1. 29 36 IPR018181 -
Lja1g2547 675 Pfam Hsp70 protein 26 629 IPR013126 GO:0005524|GO:0140662
Lja1g2547 675 SUPERFAMILY Actin-like ATPase domain 25 210 IPR043129 -
Lja1g2547 675 ProSitePatterns Heat shock hsp70 proteins family signature 2. 222 235 IPR018181 -
Lja1g2547 675 Gene3D - 533 636 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2547 Lja-Chr1 29737695 29741183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2547 18 637 Calmodulin-binding Proteins AT3G12580 67.042 0.0 856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2547 K03283 - sind:105171901 840.491