Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2537 ATGGCAGCCGCATCCACAACTCGTGAAAAGTACCTGTACATGGCAAAGCTCGCCGAGGAGGCTGAGGCCTATGACGAGATGGTGGAGTTCATGGAGAAGGTCTGCGCAGCTGCAGACAGCGAGGACCAGGAACTCACGGTGGAGGAGAGGAACCTCCTCTCGGTGGCCTACAAAAACGTGATGGGAACAAAGCGCGCTTCGTGGCGCATCATCTCCTCCAAGGAGGCGAAGGAGGAGAGCCTTGGTAACGAGGACCACCTAGACAACATCCGCGAATTCCGTTACATGGTAGAGTCCCATCTCTGTAACATCTGCGACGATGTCCTCAATCTCCTCGACTCACGCCTCATCCCGTCGGCCACCTCCGCGGAATCCAAGGTCTTCTACCTCAAGATGAAGGGTGATTACTACAGGTACCGTGCCGAGTTTAAGACATCCGACCAGCGTAAGGAGTCTGCTGAGAGCACCTTAGTTGCTTACAAATCTGCCGAGGATATTGCTAATGCAGAACTTGCTCCAACTCATCCAATTAGGCTCGGTCTTGCTCTGAACTTCTCTGTGTTTTACTATGAAATTCTCAACTCTCCTGATCGTGCCTGCAAAATCGCAAAAGACGCTTTCGATGAAGCGATATCTGAATTGGATACCTTGGGAGAGGAATCATACAAGGATAGCACTTTGATCATGCAACTTCTTCGTGATAACCTCACCCTTTGGACCTCTGAGGTGGAGGATGATGCATCAGATTAA 750 0.5093 MAAASTTREKYLYMAKLAEEAEAYDEMVEFMEKVCAAADSEDQELTVEERNLLSVAYKNVMGTKRASWRIISSKEAKEESLGNEDHLDNIREFRYMVESHLCNICDDVLNLLDSRLIPSATSAESKVFYLKMKGDYYRYRAEFKTSDQRKESAESTLVAYKSAEDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACKIAKDAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSEVEDDASD* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2537 249 ProSitePatterns 14-3-3 proteins signature 2. 222 241 IPR023409 -
Lja1g2537 249 PRINTS 14-3-3 protein zeta signature 124 146 IPR000308 -
Lja1g2537 249 PRINTS 14-3-3 protein zeta signature 159 185 IPR000308 -
Lja1g2537 249 PRINTS 14-3-3 protein zeta signature 213 242 IPR000308 -
Lja1g2537 249 PRINTS 14-3-3 protein zeta signature 186 212 IPR000308 -
Lja1g2537 249 PRINTS 14-3-3 protein zeta signature 44 73 IPR000308 -
Lja1g2537 249 PRINTS 14-3-3 protein zeta signature 93 117 IPR000308 -
Lja1g2537 249 Pfam 14-3-3 protein 14 240 IPR023410 -
Lja1g2537 249 ProSitePatterns 14-3-3 proteins signature 1. 50 60 IPR023409 -
Lja1g2537 249 PANTHER 14-3-3 PROTEIN 4 246 IPR000308 -
Lja1g2537 249 Coils Coil 14 34 - -
Lja1g2537 249 SMART 1433_4 8 249 IPR023410 -
Lja1g2537 249 Gene3D - 1 249 IPR036815 -
Lja1g2537 249 PANTHER 14-3-3-LIKE PROTEIN 16R-RELATED 4 246 - -
Lja1g2537 249 PIRSF 14-3-3 2 249 IPR000308 -
Lja1g2537 249 SUPERFAMILY 14-3-3 protein 7 242 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2537 Lja-Chr1 29484683 29486788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2537 5 249 14-3-3 family AT1G78300 76.327 3.11e-139 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2537 K06630 - gmx:100529128 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2537 1 29484683 29486788 Lja1g2537 1 29484683 29486788 ECH