Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2467 ATGGCTATGGTGGTCCTCACAACCCTCTTGTCCATGCTCACAGCCCTGCTACTTAAACTCATCTATGACAGCCTCTCATGTTACTGGCTCACTCCCCTACGCATCAAGAAGATCATGGAGATGCAAGGTGTGCGCGGCCCGAAACCGCGCCTCTTCACCGGCAACATCTTGGACATGGCTTCCCTTGTCTCAAAAACAACCTCTCAAGACATGAAAACCATCAGCCATGACATAGTTGGTCGCCTTCTACCACATTTTCTGGTCTGGTCCAGCCAGTTTGGAAAGAGGTTTCTATATTGGAATGGAACAGAGCCAAGGTTGTGTCTCACTGAGACTGATTTGATCAAAGAGTTCCTTTCAAAATGCAGCACAGTATCTGGGAAATCCTGGCAGCAAAGGCAGGGTTCCAAACATTTCATTGGGGAAGGGCTTTTGATGGCAAATGGTAAAGATTGGTACCACCAACGTCACATCGTTGCCCCTGCATTCATGGGAGACAGGCTTAAGAGCTATTCAGGGCACATGGTGCAATGCACTAAGGAGATGCTCCAATCACTAGAAAATGCAGTGGAGAGTGGAGAAACTGAGGTGGAGATTGGCCAGTACATGACCAAACTTGCTGCAGATATCATCTCTAGAACTGAGTTTGGTACAAGCTACAAGAAAGGAAAGAAAATATTCCATCTCCTCAAAGTGCTGCAGAGTCGTTGTGCACAAGCAAGTCGCCATCTTTGCTTTCCAGGGAGCAGGTTTTTTCCAAGTAAGTATAACAGAGAGATAAAGGCTTTAAAGATGGAGGTGGAGACTCTTTTGATGGAGATAATACAAAGCAGGAAAGACTGTGTGGAAATTGGGAGAAGCAATTCTTATGGGAATGATTTGTTGGGTATTCTCCTGAATGAGATGCAGAAGAAGAGAGGGGATGGAAATAGCTTGAACCTGCAGCTGGTGATGGATGAATGCAAAACATTTTTCTTTGCTGGACATGAAACCACTGCACTTTTACTCACTTGGACTGTTATGTTACTTGCCAGCAACCCTTCTTGGCAAGACAAAGTCAGAGCTGAAGTTAAAAGGGTCTGCAATGGGGAAACTCCCTCTGTGGATCTACTCTCCAAACTCACTCTATTGCATATGGTGATCAATGAATCAATGAGGCTCTACCCCCCAGCTTCAGTGCTTCCTAGAATGGCCTTTGAAGACATAGTTTTGGGTGACCTTTACATACCTAAAGGGTTATCAATTTGGATTCCTGTGCTGGCTATTCATCATAGTGAAAAACTATGGGGTAAAGATGCAAATGAGTTCAACCCAGAAAGGTTTACTTCAAAGTCATTCATTCCTGGCCGTTTTTTACCATTTGCTTCGGGCCCTAGAAATTGTGTTGGACAAGCATTTGCTTTAATGGAAGCTAAGATCATATTAGCCATGTTGATCTCTAGGTTTAGTTTCACCATTTCAGAGAATTACAAGCATGCCCCTGTGGTTGTCCTCACAATTAAGCCCAAGTATGGAGTTCAAGTTTGTTTGAAGCCCTTGGAGCCATAA 1548 0.4438 MAMVVLTTLLSMLTALLLKLIYDSLSCYWLTPLRIKKIMEMQGVRGPKPRLFTGNILDMASLVSKTTSQDMKTISHDIVGRLLPHFLVWSSQFGKRFLYWNGTEPRLCLTETDLIKEFLSKCSTVSGKSWQQRQGSKHFIGEGLLMANGKDWYHQRHIVAPAFMGDRLKSYSGHMVQCTKEMLQSLENAVESGETEVEIGQYMTKLAADIISRTEFGTSYKKGKKIFHLLKVLQSRCAQASRHLCFPGSRFFPSKYNREIKALKMEVETLLMEIIQSRKDCVEIGRSNSYGNDLLGILLNEMQKKRGDGNSLNLQLVMDECKTFFFAGHETTALLLTWTVMLLASNPSWQDKVRAEVKRVCNGETPSVDLLSKLTLLHMVINESMRLYPPASVLPRMAFEDIVLGDLYIPKGLSIWIPVLAIHHSEKLWGKDANEFNPERFTSKSFIPGRFLPFASGPRNCVGQAFALMEAKIILAMLISRFSFTISENYKHAPVVVLTIKPKYGVQVCLKPLEP* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2467 515 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2467 515 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2467 515 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2467 515 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2467 515 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2467 515 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2467 515 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2467 515 PANTHER CYTOCHROME P450 FAMILY MEMBER 3 509 - -
Lja1g2467 515 SUPERFAMILY Cytochrome P450 46 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2467 515 Coils Coil 176 196 - -
Lja1g2467 515 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 509 - -
Lja1g2467 515 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2467 515 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2467 515 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2467 515 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2467 515 Pfam Cytochrome P450 91 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2467 515 Gene3D Cytochrome P450 29 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2467 Lja-Chr1 28534821 28539842 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2467 1 375 Cytochrome P450 AT5G38450 65.608 5.62e-168 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2467 K10717 - gmx:100808392 940.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2467 1 28534821 28539842 Lja1g2467 1 28534821 28539842 ECH