Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2459 ATGGCTACCATTTCATTCAGGCATAACCCACAACTAAACGGCACTCATCAGCAAAAGGGTGTCATCACTGAGGAAATTGAAGGACTCATAAGAGTCCATCGAGATGGACGTGTTGAGAGGCCACCACTTGTGCCTCATGTCTCAAGCGCAGTGGCACCAGAACGCGGTGTCACTGCAAGAGATGTTGTAATCAACAGCAGGGACGGACCTAGCTGTGGTCATCATGGCAACAAGGTTCTTCCTCTGCTTGTTTACTTCCATGGTGGTGGATTCTGTGTTGGCTCTGCTGCTTGGAGCTGCTACCATGAGTTCTTGACCAGCCTTGCTGCCAAAGCATACTGTGTCGTTGTCTCTGTAGATTACCGTTTAGCTCCTGAGAACCGTTTACCTGCTGCATATGATGATGGCTTCAATGCTCTCATGTGGGTGAAGAGAGAAGCTCTGAATGGCTCAAGTGTGCAAAAGTGGTGGTTGAGTCATTGCAATTTATCATGCTTGTTTCTAGCTGGTGACAGTGCAGGGGCCAACATAGCTTACAATGTGGCCACTCGCCTAGGATCAAGCTCAAACATTCTGAATCCATTATCTCTCAAGGGTGTGATCTTGATCCAACCATTCTTTGGAGGAGAGGAAAGAACAATCTCTGAGAAGCATTCCTATCAGGTAATTTCAAACTTGGAGTTCTCAAACACCTTGGCAAAAGCAGGGAAAAGGGTTGAAACATTTGTCTACAAGGGAGTAGGCCATGCATTCCAAGTGCTGCATAATTATCAGCTTTCCCATTCTCGGACCCAAGAAATGATATCTCATATCAGGAACTTCCTGAACCAGTAA 834 0.464 MATISFRHNPQLNGTHQQKGVITEEIEGLIRVHRDGRVERPPLVPHVSSAVAPERGVTARDVVINSRDGPSCGHHGNKVLPLLVYFHGGGFCVGSAAWSCYHEFLTSLAAKAYCVVVSVDYRLAPENRLPAAYDDGFNALMWVKREALNGSSVQKWWLSHCNLSCLFLAGDSAGANIAYNVATRLGSSSNILNPLSLKGVILIQPFFGGEERTISEKHSYQVISNLEFSNTLAKAGKRVETFVYKGVGHAFQVLHNYQLSHSRTQEMISHIRNFLNQ* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2459 277 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 166 178 IPR033140 -
Lja1g2459 277 PANTHER ARYLACETAMIDE DEACETYLASE 224 275 - -
Lja1g2459 277 PANTHER ARYLACETAMIDE DEACETYLASE 13 221 - -
Lja1g2459 277 SUPERFAMILY alpha/beta-Hydrolases 27 277 IPR029058 -
Lja1g2459 277 Gene3D alpha/beta hydrolase 28 277 IPR029058 -
Lja1g2459 277 PANTHER CARBOXYLESTERASE 6-RELATED 224 275 - -
Lja1g2459 277 PANTHER CARBOXYLESTERASE 6-RELATED 13 221 - -
Lja1g2459 277 Pfam alpha/beta hydrolase fold 83 218 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2459 Lja-Chr1 28369968 28371427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2459 1 276 Carbohydrate Esterase AT5G16080 44.737 6.70e-87 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2459 - - gmx:100819429 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2459 1 28369968 28371427 Lja1g2459 1 28369968 28371427 ECH