Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2455 ATGGCGGCTGCAGATTCTTCGTCTCCCCGTGAGGAGAATGTTTACCTGGCCAAGTTGGCGGAGCAGGCAGAGCGGTATGAGGAGATGGTGGAGTTCATGGAGAAGGTTGCCAAGTCGGTGGACGCTGAGGAGTTGACGGTGGAGGAGAGGAACTTACTCTCTGTGGCGTACAAGAATGTGATTGGGGCGAGGAGGGCTTCCTGGAGGATCATCTCCTCCATTGAGCAGAAGGAGGAGAGCAGAGGGAATGAGGACCATGTCTCTGTTATCAAGGAGTACAGGGGAAAGATTGAGGCTGAGCTCAGCAAGATCTGTGATGGAATTTTGAATCTCCTTGAGTCCAATCTCATACCATCTGCTGCGGCCCCTGAGTCTAAGGTGTTTTACCTTAAAATGAAAGGTGACTACCACAGGTACCTTGCTGAGTTCAAGACTGGGGCAGAGAGAAAAGAAGCTGCAGAAAGTACTTTGTTAGCTTACAAATCAGCTCAGGATATTGCTCTTGCTGAACTTGCCCCCACCCACCCGATTAGGCTCGGTCTTGCACTCAACTTTTCTGTGTTCTACTATGAAATCCTTAACTCGCCAGATCGTGCTTGTAATCTTGCGAAGCAGGCATTTGATGAGGCGATTTCTGAGCTTGACACATTGGGTGAAGAGTCATACAAGGACAGTACATTGATCATGCAGCTTCTCCGAGATAATCTGACTTTGTGGACGTCCGACATTACGGATGATGCTGGAGATGAGATCAAGGAAACATCTAAGCCACAATCAGGCGATGGGGAGCAATAA 795 0.4906 MAAADSSSPREENVYLAKLAEQAERYEEMVEFMEKVAKSVDAEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIKEYRGKIEAELSKICDGILNLLESNLIPSAAAPESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKETSKPQSGDGEQ* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2455 264 Gene3D - 1 253 IPR036815 -
Lja1g2455 264 PRINTS 14-3-3 protein zeta signature 44 73 IPR000308 -
Lja1g2455 264 PRINTS 14-3-3 protein zeta signature 213 242 IPR000308 -
Lja1g2455 264 PRINTS 14-3-3 protein zeta signature 186 212 IPR000308 -
Lja1g2455 264 PRINTS 14-3-3 protein zeta signature 93 117 IPR000308 -
Lja1g2455 264 PRINTS 14-3-3 protein zeta signature 124 146 IPR000308 -
Lja1g2455 264 PRINTS 14-3-3 protein zeta signature 159 185 IPR000308 -
Lja1g2455 264 ProSitePatterns 14-3-3 proteins signature 2. 222 241 IPR023409 -
Lja1g2455 264 ProSitePatterns 14-3-3 proteins signature 1. 50 60 IPR023409 -
Lja1g2455 264 Coils Coil 16 43 - -
Lja1g2455 264 SUPERFAMILY 14-3-3 protein 9 242 IPR036815 -
Lja1g2455 264 SMART 1433_4 10 253 IPR023410 -
Lja1g2455 264 Pfam 14-3-3 protein 16 240 IPR023410 -
Lja1g2455 264 PIRSF 14-3-3 4 252 IPR000308 -
Lja1g2455 264 PANTHER 14-3-3 PROTEIN 8 259 IPR000308 -
Lja1g2455 264 PANTHER 14-3-3-LIKE PROTEIN GF14 PSI 8 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2455 Lja-Chr1 28337147 28340151 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2455 7 263 14-3-3 family AT3G02520 88.760 2.27e-169 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2455 K06630 - gmx:547889 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2455 1 28337147 28340151 Lja1g2455 1 28337147 28340151 ECH