Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2448 ATGCCTAGATCAACTGATCCTCTTGTTGTTGGAGGTGTAATAGGAGAAGTCTTAGATCCTTTTACAAGTTCTATCTCTCTAAGGGTTGTCTATAACAATACCTCACAAGTTATCAACTGTTGTGAGCTTAGGCCTTCCCAAATCGCCAGCCAACCAAGAGTTGAAGTTGGTGGTCATGACCTCAGGACCTTTTACACTCTGATCATGGTGGATCCTGATTCACCTAGCCCAGGTGATCCACATCAAAGGGAATATTTGCATTGGTTAGTAACCAATATTCCAGCAACTACAGGAGCAAACTTTGGAGAAGAGATTGTATCTTATGAAAGTCCACGACCAACAGCAGGGATTCATCGTATAGTTTTTGTGCTGTTTCGTCAGTTGGGGGGTAGACAAACACTACATGCACCTGGGTGGCGCCAAAATTTTCACACTAGAGACTTTGCCGAGGTTTACAATCTTGGATCACCTGTCGCTGCAACATACTTCAACTGTCAACGAGATGCTAGGAGTACTGCAAGGAACAGCAGGAGATAA 537 0.4395 MPRSTDPLVVGGVIGEVLDPFTSSISLRVVYNNTSQVINCCELRPSQIASQPRVEVGGHDLRTFYTLIMVDPDSPSPGDPHQREYLHWLVTNIPATTGANFGEEIVSYESPRPTAGIHRIVFVLFRQLGGRQTLHAPGWRQNFHTRDFAEVYNLGSPVAATYFNCQRDARSTARNSRR* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2448 178 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Lja1g2448 178 Gene3D - 2 174 IPR036610 -
Lja1g2448 178 CDD PEBP_euk 27 165 IPR035810 -
Lja1g2448 178 PANTHER PROTEIN, PUTATIVE-RELATED 5 174 - -
Lja1g2448 178 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 5 174 IPR035810 -
Lja1g2448 178 Pfam Phosphatidylethanolamine-binding protein 62 162 IPR008914 -
Lja1g2448 178 SUPERFAMILY PEBP-like 12 168 IPR036610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2448 Lja-Chr1 28233626 28235435 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2448 K16223 - gmx:100815008 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2448 1 28233626 28235435 Lja2g1806 2 18591550 18595701 PCT