Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2426 ATGAGAATAAGGCAACAATTTTCACTGCTTATTACTAATATCAGAAGATCTCTTCCACCTGTTAGAAATATCATCATGTCATCAGAATCTGATCATTCCCCTGCTTTCAATACCCCCAGATTGGTTCTCAAGAAGGTTTTGGCCAAATCTCAAAGAGAAGGAGATGGGGCTGTTGTTAGAAGAGGCATTGGAAGGAGCGAGTTGAAGAACTTGGACCCCTTTTTAATGTTGGATCACTTCTCAGTGTCTCCACCTGGAGGCTTCCCTGATCATCCACACAGAGGTTTTGAGACCGTCACCTACATGCTAGAGGGAGCCATAACTCACCAAGATTTTGCTGGACACAAGGGTACAATAGGGCCTGGTGATGTTCAGTGGATGACCGCGGGCAGGGGAATTGTTCACTCAGAAATGCCTGGAGAAGCAACCAACAAGGGATTGCAGCTATGGATCAATTTATCAGCTAAGGACAAAATGATTGAACCAAATTATCAAGAACTTCTAAGTGATAACATACCAACTGCAGAGAAAGATGGGGTAGAAGTGAGGGTTATAGCAGGAGAAGCAATGGGAGTCCATTCACCTGTCTACACCAGAACTCCAACCATGTACCTTGTTTTCACCATGATGCCAGGATCTGAGTGGCATCAGAGTATTCCAGAGTCATGGAATTCATTTGTCTATGTGTTTGAAGGGGAAGGAGTTTTTGGGTCTCCAAGTTCATCACCAACTATGCCATACCATGTCCTTGTTTTGAGCCTAGGTGATGGCCTTAGTGTGTGGAATAACTCATCAAAGCCTTTGAAATTTGTGCTGATTGGAGGACAACCAATTAATGAGCCAGTTGTTCAGTATGGGCCTTTTGTGATGAATACACAGTCTGAAATTGAGAAAACCATTGAAGACTATCAATATGGGAAGAATGGGTTTGAGATGAGGAATAATTGGAGATCTCAATAG 960 0.4302 MRIRQQFSLLITNIRRSLPPVRNIIMSSESDHSPAFNTPRLVLKKVLAKSQREGDGAVVRRGIGRSELKNLDPFLMLDHFSVSPPGGFPDHPHRGFETVTYMLEGAITHQDFAGHKGTIGPGDVQWMTAGRGIVHSEMPGEATNKGLQLWINLSAKDKMIEPNYQELLSDNIPTAEKDGVEVRVIAGEAMGVHSPVYTRTPTMYLVFTMMPGSEWHQSIPESWNSFVYVFEGEGVFGSPSSSPTMPYHVLVLSLGDGLSVWNNSSKPLKFVLIGGQPINEPVVQYGPFVMNTQSEIEKTIEDYQYGKNGFEMRNNWRSQ* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2426 319 Pfam Pirin C-terminal cupin domain 204 309 IPR008778 -
Lja1g2426 319 Pfam Pirin 60 151 IPR003829 -
Lja1g2426 319 CDD cupin_pirin_C 201 277 - -
Lja1g2426 319 PIRSF Pirin 38 317 IPR012093 -
Lja1g2426 319 CDD cupin_pirin_N 57 153 - -
Lja1g2426 319 PANTHER PIRIN-LIKE PROTEIN 31 319 - -
Lja1g2426 319 PANTHER PIRIN-RELATED 31 319 IPR012093 -
Lja1g2426 319 Gene3D Jelly Rolls 173 278 IPR014710 -
Lja1g2426 319 SUPERFAMILY RmlC-like cupins 40 317 IPR011051 -
Lja1g2426 319 Gene3D Jelly Rolls 53 304 IPR014710 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2426 37 312 Calmodulin-binding Proteins AT3G59220 63.309 1.10e-128 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2426 K06911 - gmx:100775597 526.939