Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2383 ATGACTGTTGAGAGGAGATTTATTGTGGTGGGAATTAGAATTGATAGCCATAGCAGGCAACTGCTCAACTGGGCTCTTGTCAAAGTTGCTCACCCTGGGGATTCTGTTATTGCTCTCCATGTAGTTACTAATTCCGATTATATTTCCAAAAGCAAGCCCTTAATTGATGATTACTTACGAGTTTATCAAGGGTTATGTGATGTCAGAAAGGTAGGTCTCTCCAGTCAGATATTAATAGGAAATTCCATTCCAAACATTCTCATCAGAGAAGCGAAAAACCGTGCTGCTGTGGCTCTAGTGCTAGGGGGTCAAGTTTCCATAGCTAAATATTGCGCCAAACGACTCCCACCCACCACCAATGTTCTTGCTATTCAAGGTGCAAAAATTGCCTTCAGAAGGTGCACTGACAAAGAACTATTAGGTAGTCTCATAGAGGATCCAAGACCAAGTCTTACTAACACAGTGATCCTGTCTGATTATGGTGACTCGGAGGTGGAGAGTGAGAAATCAACATGTGAAGATAGCAGAGAATTGGAGGAAGAAAGGTGCAAGAAAGTCTTTTCAAGATCAATATCACAGTTGGCAAGTGACTCTTCTGAGCAGAAGCTTGGATGGCCACTTCTCCGCAGGGCCAACACAGATATCTCACAGGACCGCAATGGAAGGCACATGTCTGTGGTGCAATGGGTAATGAGCTTACCGGATCGTTCACCGCGGAAAAATGCACCCCTTTCCAGCATTAGGGACAATTCGTCAGAACGGGACATCAACAGTGACATTGAGGATGAGAGCTATAAACCCAAAATCCTAAGTCGTAACTGGAGCACAGACTTTCACCCTAGCACACTCAATTGCAAGTGGTTCAGCCTTGAGGTTCTTAAGTCGTGTACTTGTCAATTCTCCTCAGAAAATCTAATTGGGAAAGGAGGTAGCAATCGTGTGTATAAAGGAACCCTCCCAGATGGGAAACCTATCGCAGTCAAAGTTATGCAGTCATCAAAAGAAGACTTGAAAGATTTTTCCCGCGAGGTGGAAATCATGTCCTCATTGAAGCACAAAGGCATCACCCCTTTACTTGGTATTTGCATTGAGGACAATGCTTTAATCTCTGTTTATGATTATTTCCCCAAAGGAAGCTTAGAGCAAAATCTACATGGCAAGAACGAGGATGGATCTTTCTTGTCATGGGAAGTCAGATTTAATGTAGCTATAGAGATTGCTGAAGCACTCAATTACCTGCACAACGAGACTTTGAAGCCTATTATACATAGAGATGTCAAGTCCTCCAACATTCTTCTTTCCCATGTGTTTGAGCCCCAATTATCTGATTTTGGACTTGCCATATGGGGACCAACAACCTCATCGTTTCTGACACAAGATGACTTAGTAGGAACATTTGGGTATCTTGCACCTGAATACTTCATGTATGGGAAGGTCAGTGACAAGATAGACGTATATGCCTTTGGTGTAGTGCTCCTTGAACTAATCTCAGGAAGGGAACCAATCAGCTCAGAGGCTTGTAAAGGAGAGGAGAGTTTGGTTGTGTGGGCAAAACCAAAATTAGATAGTGGGGATGTTAAAAGCTTGTTGGATCCAAATTTGCAAGGGAAGTTTGATGTGGTCCAGATGCAAAAAATGGTTCTGGCAGCATCTCTATGCATTACACGGGCAGCGCGGCTTCGCCCTACATTGAATCAGATACTGAAGATCTTAAAAGGACATGATGAGAAAGTGGAAAACTTCTTTAGCTCCCATGAGAATGATCATGACCATTATGAAAATCAAGAAAATATTGATGATGAAGTCTATCCAAATCCAAGTGCTGGTTTACACCTGAGCCTTGCATTACTTGATGTTGACGATGACACTACATTGTATAGCAGTACAGAGCATAGCAGTAGTGAACATTTGAAAGAACCGTGGAGCAGATCATCTAGTTTCAGTTAG 1947 0.4268 MTVERRFIVVGIRIDSHSRQLLNWALVKVAHPGDSVIALHVVTNSDYISKSKPLIDDYLRVYQGLCDVRKVGLSSQILIGNSIPNILIREAKNRAAVALVLGGQVSIAKYCAKRLPPTTNVLAIQGAKIAFRRCTDKELLGSLIEDPRPSLTNTVILSDYGDSEVESEKSTCEDSRELEEERCKKVFSRSISQLASDSSEQKLGWPLLRRANTDISQDRNGRHMSVVQWVMSLPDRSPRKNAPLSSIRDNSSERDINSDIEDESYKPKILSRNWSTDFHPSTLNCKWFSLEVLKSCTCQFSSENLIGKGGSNRVYKGTLPDGKPIAVKVMQSSKEDLKDFSREVEIMSSLKHKGITPLLGICIEDNALISVYDYFPKGSLEQNLHGKNEDGSFLSWEVRFNVAIEIAEALNYLHNETLKPIIHRDVKSSNILLSHVFEPQLSDFGLAIWGPTTSSFLTQDDLVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGREPISSEACKGEESLVVWAKPKLDSGDVKSLLDPNLQGKFDVVQMQKMVLAASLCITRAARLRPTLNQILKILKGHDEKVENFFSSHENDHDHYENQENIDDEVYPNPSAGLHLSLALLDVDDDTTLYSSTEHSSSEHLKEPWSRSSSFS* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2383 648 Gene3D Transferase(Phosphotransferase) domain 1 375 600 - -
Lja1g2383 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Lja1g2383 648 MobiDBLite consensus disorder prediction 627 648 - -
Lja1g2383 648 SMART serkin_6 300 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g2383 648 PANTHER OS01G0253100 PROTEIN 7 639 IPR045271 GO:0004714|GO:0006468
Lja1g2383 648 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 7 639 - -
Lja1g2383 648 CDD USP_Like 8 102 - -
Lja1g2383 648 SUPERFAMILY Protein kinase-like (PK-like) 279 571 IPR011009 -
Lja1g2383 648 MobiDBLite consensus disorder prediction 236 255 - -
Lja1g2383 648 ProSiteProfiles Protein kinase domain profile. 300 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g2383 648 Pfam Protein kinase domain 301 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g2383 648 Gene3D Phosphorylase Kinase; domain 1 265 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2383 Lja-Chr1 27537223 27541826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2383 288 571 Trihelix Transcription Factor Family AT1G70460 41.869 9.86e-67 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lja1g2383 Pkinase 1.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2383 - - lang:109355495 866.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2383 1 27537223 27541826 Lja1g2383 1 27537223 27541826 ECH
Lja1g2383 1 27537223 27541826 Lja1g4482 1 58322687 58326461 ECH