Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2381 ATGTCAAACCACGAAGACGACTTGGATCTCCTCCTTTCTCTTGATGATCAGGATCAGGAGAGGGTTCTCGAAACCCCTCCTGGTTCTCCCTCCCCAGGTTACTTGACCGATTCCGATTCCGATGGCGCCCCCAACCAAAGGGACAAGAACCCCGACATGTCCGTTTTCAGAAATGCTGTTCAGGATTGCCTTCTCTCTCATTCCCCTGAGCCAAAACCTAAACCTAAATCCAAACTTCCTGCTACTCATGCTAAAGATTCCGATGTCGAGAAATTTTCAGGTCTTCGAATAAGGGACCAATTGTTAACCCCTGCTGAGCTCAGGGACTCCTTTTCAGACATTCGTTTCGTTCGGTTACCAGTTATCAAGAATTTGTTTATTGGGGATTCTTTTTCTGGAAGTTGGGCGACGGTTGGAGTGTTAACCGAGAAGGGGATTCAGAGGACAAGTTCCTCAGGGAAGGGCTATTGTATATGGAAAATTGGCTGTTTGGATGAGAATACTGTTTCTCTTTTCTTGTTTGGTGATGCTTATCTGAGGAACAAGAACGAGCAGGCAGGAGCGGTTTTCGCGCTGTTTGATTGTTCCGTCCGCAAGGATGCCAAGGGTAATGGTTTTTCATTGAGTATATACTCCCCTAGTCAAATTAAGAAGATGGGAACCTCTGTTGATTATGGAGTTTGCAAAGGAGGAAGAGCAGATGGGATGGCTTGTACAATGGTCATAAATAAGCGTCATGGGGCATATTGTAAATTTCATAAATCAAAAACATCAGAGAAATATTCTACAACGAGAACTGAACTTAAGGGAGGAAACTTAAGGACAGCATTTAGGCCTAGGGATCAGTATCTCAGGTCAGAAGGAATTTTCGTAGTTGACCCGCTTGCTGACAAAACAAACTTGAAAAAGTCTCAGCCTGTGAAATTGATGTCTGTGGATGGTCTCAGAAAGGCATTGAGTAATGCAGGAAAAGTAACAACAACTATACGCTCGCAAGGGATCAGATTTCTTTCTGAGGTTGCAGGTAACTCTGATCCAAAAATTACAAACAAAGGACCAAAGACTCCAAAAGAACGAAGAACTTCCGCTGAGAAGAGGAAATCATCTTTTATGAATGTGGGATCCTCTGTCATAAGAAACCAACAGTTTGATGTAAAAAGGAAAAAAACAGATGGGCAAGATTTGGTCGATAAAACCACAAAGAGTTCGGGAAAGATGATTGAATTAGATTTTGTTAGTTCAGATGAGGACTTCTGA 1257 0.428 MSNHEDDLDLLLSLDDQDQERVLETPPGSPSPGYLTDSDSDGAPNQRDKNPDMSVFRNAVQDCLLSHSPEPKPKPKSKLPATHAKDSDVEKFSGLRIRDQLLTPAELRDSFSDIRFVRLPVIKNLFIGDSFSGSWATVGVLTEKGIQRTSSSGKGYCIWKIGCLDENTVSLFLFGDAYLRNKNEQAGAVFALFDCSVRKDAKGNGFSLSIYSPSQIKKMGTSVDYGVCKGGRADGMACTMVINKRHGAYCKFHKSKTSEKYSTTRTELKGGNLRTAFRPRDQYLRSEGIFVVDPLADKTNLKKSQPVKLMSVDGLRKALSNAGKVTTTIRSQGIRFLSEVAGNSDPKITNKGPKTPKERRTSAEKRKSSFMNVGSSVIRNQQFDVKRKKTDGQDLVDKTTKSSGKMIELDFVSSDEDF* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2381 418 MobiDBLite consensus disorder prediction 341 369 - -
Lja1g2381 418 Pfam Primase zinc finger 220 265 IPR015408 GO:0005634|GO:0006260
Lja1g2381 418 MobiDBLite consensus disorder prediction 69 87 - -
Lja1g2381 418 Gene3D - 80 254 IPR012340 -
Lja1g2381 418 MobiDBLite consensus disorder prediction 351 366 - -
Lja1g2381 418 PANTHER PROTEIN MCM10 HOMOLOG 20 367 IPR040184 GO:0003690|GO:0003697|GO:0006270
Lja1g2381 418 MobiDBLite consensus disorder prediction 1 22 - -
Lja1g2381 418 MobiDBLite consensus disorder prediction 1 87 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2381 21 417 Core DNA Replication Machinery Family AT2G20980 54.500 1.84e-138 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2381 K10736 - gmx:100527758 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2381 1 27526275 27528968 Lja1g2381 1 27526275 27528968 ECH