Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2349 ATGGCTGCGTCAAATTTCTCTACCCTGTCCTCCTCCTCCTCCTCCTTCTCCAAATCCAAACCCTTCACCAACACACCTTGTTTTCCTGGCAACAAAACCCTCCACAACCCCACCTCGTTTCCCAATCCAACAACTCTTTCCCATGCCCACAAACCCCCTTACCCATCACCATGCAAAAACCACAACACCACATTCCCAGAACCTCTCTGCAACGACGACGAAGACCAAAAGCCCCGTGAAGAGTGCGGCGTGGTGGGTATCTACGGCGACCCAGAGGCCTCTCGTCTCTGCTACCTCGCCCTCCACGCCCTCCAGCACCGCGGCCAGGAGGGCGCCGGCATCGTCACCGTGCACAACAACAAAATCTTCCAATCAGTAACCGGTGTTGGCCTCGTCGCCGACGTCTTCACCGAGGCCAAGCTTGATCAATTGCCCGGAACTCTGGCTATTGGCCATGTACGTTACTCAACCGCAGGCCAATCCATGCTGAAAAACGTGCAGCCTTTTGTTGCAGGGTACCGTTTTGGCTCTGTTGGTGTTGCACATAATGGTAACTTAGTCAATTACCGAAGCTTAAGGGAAAAACTTGAAGAAAACGGCTCCATTTTCAACACTAGTTCTGATACAGAGGTTGTGCTTCACCTCATTGCTACGTCAAAGCAGAGACCATTCATATTGAGAATCGTTGATGCCTGCGAGAAGCTTAAAGGGGCTTACTCTTTTGTGTTTGTTACAGAGGATAAGCTTGTTGCTGTGAGGGACCCTTTTGGTTTTCGACCATTGGTTATGGGGAAAAGGAGTAATGGTGCTGTTGTTTTCGCCTCTGAGACGTGTGCTCTTGATTTGATTGAAGCAGAGTACGAGAGGGAGGTGTACCCTGGTGAGGTTTTGGTGGTGGATAAAAATGGTCTTCAATCTCTCTGCCTTGTGTCTCATCCAGAGCCGAAGCAGTGTATCTTTGAGCATATTTACTTTTCACTCCCAAGTTCTGTTGTTTTTGGGAAATCTGTGTATGAATCTCGCAGGTTGTTTGGGGAAATTCTTGCCACTGAGAGCCCTGTTGAGTGTGATGTTGTGATTGCAGTTCCGGATTCTGGTGTGGTTGCTGCACTTGGTTATGCTGCAAAAGCAGGGGTTCCTTTTCAGCAGGGGTTGATCAGGTCTCACTATGTGGGGAGGACTTTCATTGAGCCGTCACAGAAGATTAGGGACCTTGGTGTGAAGTTGAAGCTCTCACCGGTAAAAGCTGTGCTTGAAGGCAAGAGGGTTGTGGTTGTGGATGACTCTATTGTGAGGGGAACCACATCTTCCAAAATTGTGAGGCTGATCAAGGAAGCAGGTGCAAAAGAAGTTCACATGAGGATTGCATGTCCACCAATTATCGGATCATGTTATTATGGGGTGGACACTCCAAGTTCAGAGGAATTGATTTCAAATAGAATGAGTGTGGATGAAATACGGGAGTTTATTGGATCAGATTCACTCGCTTTTCTTCCACTTGATTGCTTGAAGAAATTGTTGGGAGAAGATGACTCTCCTAATTTCTGTTATGCTTGCTTCTCCGGGAGGTATCCTGTTGAACCTACTGAACTTGAAGTCAAGAGTGTTGGTAACTTAGTGGATAATGGCTTAAATGGGAGTTTGGAATCTATTGATGAGAGTTTGGTTCAAGCAAACCGAAATCAGAAAGAGGTGAAGATTGCTAGTATCTAA 1713 0.4734 MAASNFSTLSSSSSSFSKSKPFTNTPCFPGNKTLHNPTSFPNPTTLSHAHKPPYPSPCKNHNTTFPEPLCNDDEDQKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVHNNKIFQSVTGVGLVADVFTEAKLDQLPGTLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRSLREKLEENGSIFNTSSDTEVVLHLIATSKQRPFILRIVDACEKLKGAYSFVFVTEDKLVAVRDPFGFRPLVMGKRSNGAVVFASETCALDLIEAEYEREVYPGEVLVVDKNGLQSLCLVSHPEPKQCIFEHIYFSLPSSVVFGKSVYESRRLFGEILATESPVECDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDLGVKLKLSPVKAVLEGKRVVVVDDSIVRGTTSSKIVRLIKEAGAKEVHMRIACPPIIGSCYYGVDTPSSEELISNRMSVDEIREFIGSDSLAFLPLDCLKKLLGEDDSPNFCYACFSGRYPVEPTELEVKSVGNLVDNGLNGSLESIDESLVQANRNQKEVKIASI* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2349 570 Gene3D - 342 506 IPR029057 -
Lja1g2349 570 Pfam Glutamine amidotransferase domain 161 280 IPR017932 -
Lja1g2349 570 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 37 556 - -
Lja1g2349 570 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 82 525 IPR029055 -
Lja1g2349 570 MobiDBLite consensus disorder prediction 1 60 - -
Lja1g2349 570 MobiDBLite consensus disorder prediction 1 46 - -
Lja1g2349 570 CDD PRTases_typeI 340 456 IPR000836 -
Lja1g2349 570 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 82 318 IPR029055 -
Lja1g2349 570 CDD GPATase_N 82 333 IPR035584 -
Lja1g2349 570 Hamap Amidophosphoribosyltransferase [purF]. 81 524 IPR005854 GO:0004044|GO:0009113
Lja1g2349 570 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 82 302 IPR017932 -
Lja1g2349 570 Pfam Phosphoribosyl transferase domain 340 453 IPR000836 -
Lja1g2349 570 SUPERFAMILY PRTase-like 318 530 IPR029057 -
Lja1g2349 570 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 37 556 - -
Lja1g2349 570 TIGRFAM purF: amidophosphoribosyltransferase 82 525 IPR005854 GO:0004044|GO:0009113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2349 Lja-Chr1 27200514 27203012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2349 62 557 PRT Gene Family AT2G16570 81.489 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2349 K00764 - gmx:100801720 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2349 1 27200514 27203012 Lja1g2349 1 27200514 27203012 ECH