Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2318 ATGGCTTCTTCAAGCGGAACATCTTCAGGGTCTTCGATGATTCAGAACTCTGGTTCAGAGGAGGAGTTGCAGGCGCTGATGGATCAGAGGAAGAGGAAGAGAATGATATCAAACCGTGAATCTGCAAGGAGATCTAGAATGAGGAAACAGAAGCACCTTGATGAGCTCGCTGCACAGGTAGCTCAGCTCAGGAGCGAGAATCAACAGATGCTCACATCGCTCAACCTCACCACACAACGATTCATGATCATTGATGCAGAGAACTCTGTTCTCAGTGCTCAAATGGGTGAACTCAGCCACAGGCTAGAGTCCTTGAATGAGATCATCGACTTTGTGAATGCCACCAATGGTGTTTTTGCTGCAAACTCCTTCGTGGACCCCATCCCCAGTGCTTACTATCTGAACCACCCCATCATGGCTTCTGCAGATATATTGCAGTACTGA 444 0.4797 MASSSGTSSGSSMIQNSGSEEELQALMDQRKRKRMISNRESARRSRMRKQKHLDELAAQVAQLRSENQQMLTSLNLTTQRFMIIDAENSVLSAQMGELSHRLESLNEIIDFVNATNGVFAANSFVDPIPSAYYLNHPIMASADILQY* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2318 147 PANTHER BZIP TRANSCRIPTION FACTOR 11-LIKE 1 145 - -
Lja1g2318 147 SUPERFAMILY Leucine zipper domain 30 81 IPR046347 GO:0003700|GO:0006355
Lja1g2318 147 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 145 - -
Lja1g2318 147 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Lja1g2318 147 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Lja1g2318 147 MobiDBLite consensus disorder prediction 1 23 - -
Lja1g2318 147 MobiDBLite consensus disorder prediction 1 51 - -
Lja1g2318 147 Gene3D - 28 83 - -
Lja1g2318 147 CDD bZIP_plant_GBF1 31 82 IPR045314 GO:0003700|GO:0006355
Lja1g2318 147 Pfam bZIP transcription factor 30 75 IPR004827 GO:0003700|GO:0006355
Lja1g2318 147 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Lja1g2318 147 MobiDBLite consensus disorder prediction 24 51 - -
Lja1g2318 147 Coils Coil 46 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2318 Lja-Chr1 26863597 26865046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2318 24 147 bZIP Transcription Factor Family AT4G34590 49.640 1.73e-43 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja1g2318 bZIP_1 2.6e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2318 K25786 - gmx:100101862 199.904
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2318 1 26863597 26865046 Lja1g2318 1 26863597 26865046 ECH