Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2251 ATGGTGGATCGGCGTGGCATAGTGTGGTTTGGGTTCTTGTTGTTCTTTCTGCTGTTTGGGGTGACACTGTCGCAGATTGAGCCACTGAGTTCAACTACTGAGCGAGAAGCGCTTCTGGAACTGAGGGGTTCTTTGGGGTTGAGGAGCAAGGAATGGCCAAGAAAACCAGACCCTTGTTTAATCTGGATTGGTATTACTTGTCAGAATGGTCGTGTTATTGGGATCAACATCTCTGGTTTCAGAAGAACAAGGCTTGGTAGGAGAAACCCTCAATTTGCCGTTGAAGCTTTGGCCAATTTCACTCTCTTGCAGTCATTCAATGCCTCCAGTTTCTACCTTCCTGGTCCTATTCCTGATTGGTTTGGCCTCAAACTCCCTTCGCTTCAGGTGCTTGATCTTCGTTCTTGCTCCATTGTCAATGCTATTCCTTCCACTATTGGGAATTTAACCAACCTTACTAGTCTTTACCTTTCTGATAACAAGTTAACTGGTTCAGTTCCTGAGAGTTTGGGTCAACTCTCTGGCCTTTCGGTTCTTGATCTCTCTAGGAATTCTCTTGCTGGTTCCCTGCCAGCATCTTTTGCCTTTCTAGAAAACCTTAATTCCCTTGACATGTCCTCCAATTTTCTGTCGGGACCGATTCCTCCCGGCATAGGGAACCTCACCAGGTTACAGTACTTGAATCTTTCCAGCAATGACCTGACTTCTTTGCCAGCCCAACTGGGGGGTCTTACTAGCTTAGTTGACCTTGATGTTAGTGAGAATTCTTTCTCCGGTGGAGTTTTTCCAGATTTGAAAGGGTTGAGAAACTTGCAGAGAGTGGTACTTGCAAGCAGCATGCTTAATGGGCCTTTGCCGCGGGACTTGTTTACTGTTTCATTGCAGTTGCAGCTCATAGTGCTGAGACAAAATAATTTTACTGGTTCTTTGCCTTTTGAGTTGTTTTCTCTGCCAAGATTGACCTTCCTAGATGTGTCTGCCAATAACTTCAGTGGTCCGCTCCCTAATTCCAGTTCCGCTGCTTATGGTGCCGTTGCTGCTGCGGTGCTCAATATTTCTCATAATACATTTTATGGAGGCCTCACACCTGTGCTCAGAAGGTTCAGTTTTGTTGATGTTTCGAATAACTATTTTGAGGGGAAGGTGCTGGATTTCATGGGTAATGTTTCTGTAGATAGAAACTGCATGCAAAACATGAGGAATCAGAGGACAACGGTGGATTGTGCATCGTTTTATGCTGAGAGGGGCCTCAATTTCGATAACTTTGGACGCCCGAACTCTACAAGTCCTCCCACTGCAGAAGGCTCTAAGAAGAGTAATAAAACTTGGATTGTATTGGCAGCAGCCTTAGGTGGACTGGGTTTAATACTTTTAGTGTTCCTACTGGTACTGTTGCTTCTGTGCACTCGTCGGAGAGGTAATTCGAATCAAAGGGGAAACGGTGTGGGCCCTGCACCTGCTGGAGGCAGTTCTCCACAGCCCGGTGCACCAGTAAACTTTTCTAATATAGGAGACTCATTTACATATCATCAGTTGCTCCAAGCAACAGGAGATTTCAATGATGCAAATCTTATCAAACATGGCCACACCGGGGATCTCTTCAATGGTGTTTTAGAAAATGGCATGCGTGTTGTAATCAAAAGGGTTGACACACGTTCAATTAAGAAGGACGCTTACCTATTGGAACTGGACTTTTTCAACAAGGTTTCTCATCAAAGATTTGTTCCCTTGTTAGGTCATTGCTTAGAAAATGAGAACGAGAAGTTCCTGGTTTATAAGCATATGCCAAATGGGGACATGTCTCATTGCTTATTGTATAAAAACACTACATCTGAAGATGATTCTTGGCAGTCATTGGACTGGATAACAAGGTTAAAAATTGCTACTGGAGTAGCAGAGGCCCTAACGTATCTGCATCATGAATGTATTCCACCCATTGTTCACAGAGATATTCAAGCGAGCAGTATACTTCTAGATGATAAATATGAAGTTCGGTTAGGGAGTCTAAGTGAAGCCTGTGTTCAAGAAGGAGATACTCATCAAAGTAAAATCACCCGGTTTCTGCGAATGCCTCAGTCCTCTGAGCAAGGCAAATCTGGTTCATTAACATCAGTTTGCACCTATGACGTTTATTGCTTTGGGAAAGTGTTGCTTGAGCTGGTGACTGGTAAGATGGGAATCAGTGCATCCAATGAGGGTGAAGTAAAGGAATGGCTTGATCAGATTCTACCTTGCATTAGTATGTATGACAAGGAGCTTGTGACAAAAATTGTTGACCCATCTCTGGTTGTTGATGAGGATTTCTTAGAGGAAGTGTGGGCTATAGCCATTGTTGCCAGGTCTTGCCTAAATCCAAAACCTTCAAGAAGGCCTCCAATGAGATATATCCTCAAGGCTTTGGAAAACCCTTTAAAAGTTGTGAGGGAAGAAGCTTCTGGTTCTGCACGGCTCAAAGCAACCTCTTCTAGAGGCTCCTGGAATGCAACCTTGTTCGGTAGCTGGCGTCAGAGTTTGTCGGATGTAACAGCAATTCCAGCAGCCTCTGGTACAAAGCAAGAAGGAACTAGTAGTTTAAAGCTTTCAGGAACTTCCGGCTCACACTCTTCGTCATCTCGGCGACGCCATTCAAATGAGATATTTCCAGAGCCATCCGGCACACGTGATGTAGAGAGGCTGGAGCATCAATAA 2688 0.4446 MVDRRGIVWFGFLLFFLLFGVTLSQIEPLSSTTEREALLELRGSLGLRSKEWPRKPDPCLIWIGITCQNGRVIGINISGFRRTRLGRRNPQFAVEALANFTLLQSFNASSFYLPGPIPDWFGLKLPSLQVLDLRSCSIVNAIPSTIGNLTNLTSLYLSDNKLTGSVPESLGQLSGLSVLDLSRNSLAGSLPASFAFLENLNSLDMSSNFLSGPIPPGIGNLTRLQYLNLSSNDLTSLPAQLGGLTSLVDLDVSENSFSGGVFPDLKGLRNLQRVVLASSMLNGPLPRDLFTVSLQLQLIVLRQNNFTGSLPFELFSLPRLTFLDVSANNFSGPLPNSSSAAYGAVAAAVLNISHNTFYGGLTPVLRRFSFVDVSNNYFEGKVLDFMGNVSVDRNCMQNMRNQRTTVDCASFYAERGLNFDNFGRPNSTSPPTAEGSKKSNKTWIVLAAALGGLGLILLVFLLVLLLLCTRRRGNSNQRGNGVGPAPAGGSSPQPGAPVNFSNIGDSFTYHQLLQATGDFNDANLIKHGHTGDLFNGVLENGMRVVIKRVDTRSIKKDAYLLELDFFNKVSHQRFVPLLGHCLENENEKFLVYKHMPNGDMSHCLLYKNTTSEDDSWQSLDWITRLKIATGVAEALTYLHHECIPPIVHRDIQASSILLDDKYEVRLGSLSEACVQEGDTHQSKITRFLRMPQSSEQGKSGSLTSVCTYDVYCFGKVLLELVTGKMGISASNEGEVKEWLDQILPCISMYDKELVTKIVDPSLVVDEDFLEEVWAIAIVARSCLNPKPSRRPPMRYILKALENPLKVVREEASGSARLKATSSRGSWNATLFGSWRQSLSDVTAIPAASGTKQEGTSSLKLSGTSGSHSSSSRRRHSNEIFPEPSGTRDVERLEHQ* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2251 895 Gene3D Ribonuclease Inhibitor 194 418 IPR032675 -
Lja1g2251 895 Gene3D Phosphorylase Kinase; domain 1 496 594 - -
Lja1g2251 895 PANTHER BNAA07G03560D PROTEIN 185 849 - -
Lja1g2251 895 PANTHER RECEPTOR-LIKE PROTEIN 55 12 189 - -
Lja1g2251 895 Pfam Protein tyrosine and serine/threonine kinase 525 798 IPR001245 GO:0004672|GO:0006468
Lja1g2251 895 ProSiteProfiles Leucine-rich repeat profile. 223 245 IPR001611 GO:0005515
Lja1g2251 895 ProSiteProfiles Protein kinase domain profile. 519 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g2251 895 Gene3D Transferase(Phosphotransferase) domain 1 595 819 - -
Lja1g2251 895 MobiDBLite consensus disorder prediction 845 870 - -
Lja1g2251 895 MobiDBLite consensus disorder prediction 845 895 - -
Lja1g2251 895 SUPERFAMILY Protein kinase-like (PK-like) 499 800 IPR011009 -
Lja1g2251 895 PANTHER RECEPTOR-LIKE PROTEIN 55 185 849 - -
Lja1g2251 895 Gene3D Ribonuclease Inhibitor 31 193 IPR032675 -
Lja1g2251 895 Pfam Leucine rich repeat 126 186 IPR001611 GO:0005515
Lja1g2251 895 PANTHER BNAA07G03560D PROTEIN 12 189 - -
Lja1g2251 895 MobiDBLite consensus disorder prediction 871 895 - -
Lja1g2251 895 SUPERFAMILY L domain-like 93 397 - -
Lja1g2251 895 MobiDBLite consensus disorder prediction 476 495 - -
Lja1g2251 895 SMART LRR_typ_2 173 196 IPR003591 -
Lja1g2251 895 SMART LRR_typ_2 149 172 IPR003591 -
Lja1g2251 895 SMART LRR_typ_2 221 244 IPR003591 -
Lja1g2251 895 SMART LRR_typ_2 125 148 IPR003591 -
Lja1g2251 895 SMART LRR_typ_2 317 341 IPR003591 -
Lja1g2251 895 SMART LRR_typ_2 197 220 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2251 Lja-Chr1 26249518 26255332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2251 30 692 Miscellaneous Gene Families AT2G16250 55.887 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Lja1g2251 PK_Tyr_Ser-Thr 4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2251 - - gmx:100805769 1329.31