Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2214 ATGTCGTACAACTCCACGGTGGCGACACGGCTGGGGCGACGGAGAATCCCCATACACACGACCCTCTACTGGGGCTACAAGGTGAACATACTGTTCCATTGCTGGCCCGGAAATAGCGCCGCCATGTACGCGGTGGCGCTAATGCTCGTGTTCGCCATGGCGGTATTGGTGGAGTGGCTTTCCTTCACCAACATTGTGAAGCTCAAGCCCGGGGGTTCAAACCACGTCGTTGAGGCGCTCCTTAAGACGGGGCTCTACGGCGTGCGTTCCGGGCTTTCTTACTTGGTAATGCTGGCCGTCATGTCGTTTAATGGCGGCGTTTTCCTCGCCGCAATTGGCGGCCACGTCATTGGTTTCTTGATTTTCGGTACGCAGGCCTTCCGGAAGAAGTCATTAGGCGGATTGGATTCTTCAAAACTGTAG 423 0.5579 MSYNSTVATRLGRRRIPIHTTLYWGYKVNILFHCWPGNSAAMYAVALMLVFAMAVLVEWLSFTNIVKLKPGGSNHVVEALLKTGLYGVRSGLSYLVMLAVMSFNGGVFLAAIGGHVIGFLIFGTQAFRKKSLGGLDSSKL* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2214 140 Pfam Ctr copper transporter family 75 122 IPR007274 GO:0005375|GO:0016021|GO:0035434
Lja1g2214 140 Pfam Ctr copper transporter family 22 63 IPR007274 GO:0005375|GO:0016021|GO:0035434
Lja1g2214 140 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 3 130 IPR007274 GO:0005375|GO:0016021|GO:0035434
Lja1g2214 140 PANTHER COPPER TRANSPORTER 4 3 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2214 Lja-Chr1 25715201 25715623 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2214 21 131 Inorganic Solute Cotransporters AT5G59030 49.550 4.67e-36 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2214 K14686 - gmx:100803410 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2214 1 25715201 25715623 Lja1g2214 1 25715201 25715623 ECH