Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2213 ATGGACATGCCCATGTCTAACAGCACGATGCCGATGGAGATGCAGATGAGTTTCTATTGGGGAAAACATGCCACAGTGCTTTTTTCTGGGTGGCCTAACAACAGTGTTGGCATGTACATCTTAGCTCTCTTTTTTGTGTTCTCTTTAGCCATTACGACTGAGATTTTGTCGAACCAGCCACTCGTCAAGCGCGGGACTAGTCCCCTCAAGGGAGGGCTTATTCTGGCTTCTGTCCATTTCTTTCGCACCGGTCTCGCTTACCTGGTGATGCTTGCTGTCATGTCCTTCAACGTTGGAATCTTCATAGCTGCTGTTGCTGGACACACCTTGGGATTTTTCATTGCAAAGTCTCGTGCTATTGCGGTAGCAAACAAGGAAAATCAAGAGTCCTCCTCTCCTACTCTCAAAATTTGA 414 0.471 MDMPMSNSTMPMEMQMSFYWGKHATVLFSGWPNNSVGMYILALFFVFSLAITTEILSNQPLVKRGTSPLKGGLILASVHFFRTGLAYLVMLAVMSFNVGIFIAAVAGHTLGFFIAKSRAIAVANKENQESSSPTLKI* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2213 137 PANTHER CTR FAMILY COPPER TRANSPORTER 2 131 - -
Lja1g2213 137 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 2 131 IPR007274 GO:0005375|GO:0016021|GO:0035434
Lja1g2213 137 Pfam Ctr copper transporter family 68 114 IPR007274 GO:0005375|GO:0016021|GO:0035434
Lja1g2213 137 Pfam Ctr copper transporter family 16 57 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2213 Lja-Chr1 25710868 25711659 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2213 17 133 Inorganic Solute Cotransporters AT5G59030 46.667 1.38e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2213 K14686 - gmx:100808693 177.178