Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2206 ATGGCCGTATGTGAGGAAGAGGTGAAGCTTTTGGGATTTGTGAGAAGCCCATTTGTCAACAGGGTTCAGATTGCTCTGAAGTTAAAGGGCGTTGAGTACAAATTTCTGGAAGAAGATGTGAGCAATAAAAGTGATCTGCTCCTCAAGTACAACCCTGTTTATAAGAGGGTTCCTGTGTTTGTTCATAATGAGAAGCCCATAGCAGAGTCCCTTTTGATTCTTGAGTACATCGATGAGACATGGAAACACAATCCTATGTTGCCTTCTGACCCTTACCAAAGAGCCTTGGCTCGTTTCTGGTCCAAGTTCATCGATGACAAGTGCGTGCCTGCTGTACGGAAATCTGTTTTTAGCGATGATGAGAAAGAGCGAGAGAAGAATTATGAGGAATCACTAGAGGCTCTGCAGTTTCTTGAGAATGAACTCAAAGACAAGTTCTTCGGGGGAGAGGAGTTTGGGTTTGTGGATATTGTTGCTGTCTTCATAGCTTTTTATATTCCTATAGTTGAAGAAGTTACTGGGCTGCAGTGGTTGACCAGTGAAAAGTTCCCAAAGCTGTATCAATGGAGCCAAGAACTTCTTAACCACCCAGTAGTCAAAGAATCTCTGCCTCCTAGAGATCCAATTTTGGCCTATTTCAAAGCTACCTATGAGAGTCTTGCTGCTTCTAAATAG 675 0.4296 MAVCEEEVKLLGFVRSPFVNRVQIALKLKGVEYKFLEEDVSNKSDLLLKYNPVYKRVPVFVHNEKPIAESLLILEYIDETWKHNPMLPSDPYQRALARFWSKFIDDKCVPAVRKSVFSDDEKEREKNYEESLEALQFLENELKDKFFGGEEFGFVDIVAVFIAFYIPIVEEVTGLQWLTSEKFPKLYQWSQELLNHPVVKESLPPRDPILAYFKATYESLAASK* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2206 224 CDD GST_N_Tau 8 81 - -
Lja1g2206 224 SUPERFAMILY Thioredoxin-like 8 109 IPR036249 -
Lja1g2206 224 Gene3D Glutaredoxin 1 89 - -
Lja1g2206 224 CDD GST_C_Tau 91 215 IPR045074 GO:0004364|GO:0006749
Lja1g2206 224 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 220 - -
Lja1g2206 224 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Lja1g2206 224 SUPERFAMILY GST C-terminal domain-like 79 218 IPR036282 -
Lja1g2206 224 SFLD Main.3: Omega- and Tau-like 5 223 IPR045073 -
Lja1g2206 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 212 IPR010987 -
Lja1g2206 224 Pfam Glutathione S-transferase, C-terminal domain 100 197 IPR004046 -
Lja1g2206 224 Gene3D - 90 224 - -
Lja1g2206 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Lja1g2206 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 220 IPR045073 -
Lja1g2206 224 SFLD Glutathione Transferase (cytosolic) 5 223 IPR040079 -
Lja1g2206 224 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2206 Lja-Chr1 25564027 25565724 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2206 6 220 Glutathione S-transferase Gene Family AT2G29420 52.778 1.71e-78 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2206 K00799 - gmx:100527851 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2206 1 25564027 25565724 Lja1g2206 1 25564027 25565724 ECH