Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2205 ATGTCTTCACATCAGGAAGACGTGAAGCTTTTGGGTTTGGGGAGCCCATTTGTGTGCAGGGTACAAATTGCTCTGAAGTTTAAGGGAGTTGGATACAAATTTCTTGAAGAAAACTTGAGAAATAAGAGTGATCTGCTTCTCAAATACAACCCTGTACACAAGAAGGTTCCGGTGTTTGTTCACAATGAGAAGCCCATAGCAGAGTCCCTTGTGATTCTTGAGTACATTGATGAGACCTGGAAAAGCAACCCCATCTTGCCTTCTGATCCTTACCAAAGAGCAATAGCCAGATTCTGGTCCAAATTCATAGATGACAAGTGTGTGACTGCTATACGAAAAGCTGCTTTTAGCGATGATAAAAAAGAGCGAGAGAAGAGTTTTGATGAATCAGTTGAGGCTCTGCAGTTTCTTGAAGATGAACTCAAAGACAGGTTCTTCGGGGGAGAGGAGTTTGGGTTTGTTGATATTGTTGCTGTCTTCGTAGCTTTTTGGATCCCTATAGTTCAAGAAGTTACAAGGCTGCAGTTGTTAACCAGTGAAAAGTTTCCCAAGTTGTACCGATGGAGCCAAGAATTTCTTAACCAACCAGTTGTCAAAGAATCTCTTCCTCCTAGGGATCCAATTTTGGCCTATTACAAAGCAAGATATGAGAGTCTTACTGCTTCAAAAATTGATTGA 678 0.413 MSSHQEDVKLLGLGSPFVCRVQIALKFKGVGYKFLEENLRNKSDLLLKYNPVHKKVPVFVHNEKPIAESLVILEYIDETWKSNPILPSDPYQRAIARFWSKFIDDKCVTAIRKAAFSDDKKEREKSFDESVEALQFLEDELKDRFFGGEEFGFVDIVAVFVAFWIPIVQEVTRLQLLTSEKFPKLYRWSQEFLNQPVVKESLPPRDPILAYYKARYESLTASKID* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2205 225 SFLD Main.3: Omega- and Tau-like 5 222 IPR045073 -
Lja1g2205 225 SUPERFAMILY Thioredoxin-like 14 107 IPR036249 -
Lja1g2205 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Lja1g2205 225 Pfam Glutathione S-transferase, C-terminal domain 106 196 IPR004046 -
Lja1g2205 225 SFLD Main (cytGST) 5 222 - -
Lja1g2205 225 CDD GST_C_Tau 90 215 IPR045074 GO:0004364|GO:0006749
Lja1g2205 225 CDD GST_N_Tau 8 80 - -
Lja1g2205 225 Gene3D Glutaredoxin 1 88 - -
Lja1g2205 225 Pfam Glutathione S-transferase, N-terminal domain 12 78 IPR004045 -
Lja1g2205 225 Gene3D - 89 223 - -
Lja1g2205 225 SUPERFAMILY GST C-terminal domain-like 78 217 IPR036282 -
Lja1g2205 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 211 IPR010987 -
Lja1g2205 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 219 IPR045073 -
Lja1g2205 225 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2205 Lja-Chr1 25562449 25563373 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2205 3 222 Glutathione S-transferase Gene Family AT3G09270 51.339 2.16e-80 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2205 K00799 - gmx:100527851 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2205 1 25562449 25563373 Lja1g2205 1 25562449 25563373 ECH