Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2204 ATGGCTGCATCAGGGGAAAATGTGCAACTATTGGGAATTGTGGGAAGCCCATTCGTGTGCAGGGTACAGATTGCTCTCAACCTGAAGGGAGTTGAATACGAATTCGTGGAACAAATCTTTGGCCAAAAGAGTGATCTGCTCCTCAAATACAACCCAGTTCACAAGAAGGTTCCTGTGTTTGTTCACAATGACAAGCCCATAGCAGAGTCCCTTGTGATTCTTGAGTACATTGATGAGACATGGAAAAGCAACCCAATCTTGCCTTCTGATCCTTATAAGAGAGCATTGGCACGGTTCTGGTCCAAGTTCATCGATGATAAGGTCATCGATACAACATGGAAAGCTGTTTTCACCTTGGAAGAGGCAGAGCGTGAGAAGATAATTGAAGAACTATCTGAGGCTCTGCAGTATCTTGAGAACGAGTTGAAGGAGAAGTTCTTTGGGGGAGAGGAGTTTGAGTTTGTGGACATTGCTGCTGTGTTCATAGCTTTTTATATCCCTTTGTTTCAAGAAGTAGCAGGACTGCACTTGTTAACAGCTGAAAATTTTCCCAAGCTATACAATTGGAGTCAAGACTTTCTGAATCATCCAGTTGTCAAAGAATCTATGCCCCCTAGAGACCCACTTCTTGCCATTTTCAAAGGTCGCTATGAAAGCCTTACTGCTTCAAAATAA 675 0.4311 MAASGENVQLLGIVGSPFVCRVQIALNLKGVEYEFVEQIFGQKSDLLLKYNPVHKKVPVFVHNDKPIAESLVILEYIDETWKSNPILPSDPYKRALARFWSKFIDDKVIDTTWKAVFTLEEAEREKIIEELSEALQYLENELKEKFFGGEEFEFVDIAAVFIAFYIPLFQEVAGLHLLTAENFPKLYNWSQDFLNHPVVKESMPPRDPLLAIFKGRYESLTASK* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2204 224 Gene3D Glutaredoxin 1 89 - -
Lja1g2204 224 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 220 - -
Lja1g2204 224 CDD GST_N_Tau 8 81 - -
Lja1g2204 224 SFLD Main (cytGST) 6 222 - -
Lja1g2204 224 SFLD Main.3: Omega- and Tau-like 6 222 IPR045073 -
Lja1g2204 224 SUPERFAMILY GST C-terminal domain-like 79 218 IPR036282 -
Lja1g2204 224 Pfam Glutathione S-transferase, N-terminal domain 8 79 IPR004045 -
Lja1g2204 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 223 IPR010987 -
Lja1g2204 224 Gene3D - 90 224 - -
Lja1g2204 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Lja1g2204 224 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Lja1g2204 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 220 IPR045073 -
Lja1g2204 224 Pfam Glutathione S-transferase, C-terminal domain 120 197 IPR004046 -
Lja1g2204 224 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Lja1g2204 224 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2204 Lja-Chr1 25560734 25562068 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2204 6 223 Glutathione S-transferase Gene Family AT3G09270 52.036 1.86e-80 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2204 K00799 - gmx:100500680 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2204 1 25560734 25562068 Lja1g2204 1 25560734 25562068 ECH