Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2203 ATGGCTGCATCAGGGGAAAATGTGCAACTTTTGGGAATTGTGGGAAGCCCATTTGTGTGCAGGGTACAGATTGCTCTCAAGCTGAAGGGAGTTGAATACGAATTCGTGGAACAAACCTTGGGTCAAAAGAGTGAACTGCTCCTCAAATACAACCCTGTTCATAAGAAGGTTCCTGTTCTTGCTCACAATGAGAAGCCCATAGCAGAGTCCCTTGTGATTCTTGAGTACATCGATGAAACATGGAAACACAACCCCATCTTGCCTTCTGAACCTTACCAGAGAGCCATGGCCAGATTCTGGTCCAAATTCATAGATGACAAGGTCGTGGATACAACATGGAAATCTGTTTTCACAGTGGAAGAGGAAGAGCGTGAGAAGAGAATTGAAGAATTATCTGAGGCACTGCAGTTTCTTGAGAATGAGCTGAAGGACAAGTTTTTTGGGGGAGAGGAGTTTGGGTTTGTGGACATTGCTGCTGTGTTTGTAGCTTTTTATGTCCCTTTGTTTCAAGAAATAGCAGGGTTGCACTTGTTCACAGCTGAGAAATTTCCCAAGCTCTACGACTGGAGTCAAGACTTTCTGAACCATCCAGTTGTGAAAGAATCTCTGCCCCCTAGAGATCCACTTTTTGCCTTTTTCAAAGGTCGCTATGAAAGCCTTACTGCTTCAAAATAA 675 0.44 MAASGENVQLLGIVGSPFVCRVQIALKLKGVEYEFVEQTLGQKSELLLKYNPVHKKVPVLAHNEKPIAESLVILEYIDETWKHNPILPSEPYQRAMARFWSKFIDDKVVDTTWKSVFTVEEEEREKRIEELSEALQFLENELKDKFFGGEEFGFVDIAAVFVAFYVPLFQEIAGLHLFTAEKFPKLYDWSQDFLNHPVVKESLPPRDPLFAFFKGRYESLTASK* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2203 224 CDD GST_N_Tau 8 81 - -
Lja1g2203 224 SFLD Main (cytGST) 6 222 - -
Lja1g2203 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 220 IPR045073 -
Lja1g2203 224 SUPERFAMILY GST C-terminal domain-like 79 218 IPR036282 -
Lja1g2203 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 212 IPR010987 -
Lja1g2203 224 Gene3D Glutaredoxin 1 89 - -
Lja1g2203 224 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 220 - -
Lja1g2203 224 Pfam Glutathione S-transferase, N-terminal domain 8 79 IPR004045 -
Lja1g2203 224 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Lja1g2203 224 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Lja1g2203 224 Gene3D - 90 224 - -
Lja1g2203 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Lja1g2203 224 SFLD Main.3: Omega- and Tau-like 6 222 IPR045073 -
Lja1g2203 224 Pfam Glutathione S-transferase, C-terminal domain 118 197 IPR004046 -
Lja1g2203 224 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2203 Lja-Chr1 25552448 25553793 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2203 6 223 Glutathione S-transferase Gene Family AT3G09270 53.394 1.19e-79 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2203 K00799 - gmx:100807613 359.762