Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2202 ATGGCCGGAAGTGAGGAAGAGGTGAAGCTTTTCGGATCTGTGGGAAGCCCATTTGTGATCAGGGTTCAGATTGCTCTCAAATTGAAGGGAGTTGAATATAATTACCAGGAAGAAACCTTGGGCAGCTTGAGTGATACGCTCCTCAAATTCAACCCAGTTTACAAGATGGTTCCTGTGTTTCTTCACAAAGGGAAACCTATTTCAGAGTCCCTTGTGATCCTGGAGTACATCGATGAGACATGGAAACACAACCCCATCTTGCCTTCTGACCCTTACCAGAGAGCCATGGCCAGATTCTGGTCCAAGTTCATAGATGATAAGTGCGTTGCTCCTGCTTGGAAATCTGCTTTTATGATTGATGAGAAGGAGCGTGAAAAGGCTGCTGAGGAATTATTTGAGGCTCTGCAGTTTCTTGAGAATGAGCTGAAGGACAAGAAGTTCTTTGGAGGAGAGGAGTTTGGCTTTGTGGATATCGCTGCTCTTTTCATACCTTTATTTAAAGAAGTGGCTGAGTTCAAGTTGTTCACAAGTGACCAATTTCCAAAGCTATACAAATGGAGCCAAGAATTTTATAACCATCCAGTTGTGAAGGAAAATATGCCTTCTAAAGACCAACTTTTTGGTTATTTCAAAGCTCGCTCCGCAACCCTTGCTGCCTCAAGAAAATAG 669 0.4335 MAGSEEEVKLFGSVGSPFVIRVQIALKLKGVEYNYQEETLGSLSDTLLKFNPVYKMVPVFLHKGKPISESLVILEYIDETWKHNPILPSDPYQRAMARFWSKFIDDKCVAPAWKSAFMIDEKEREKAAEELFEALQFLENELKDKKFFGGEEFGFVDIAALFIPLFKEVAEFKLFTSDQFPKLYKWSQEFYNHPVVKENMPSKDQLFGYFKARSATLAASRK* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2202 222 CDD GST_N_Tau 8 81 - -
Lja1g2202 222 Gene3D - 87 221 - -
Lja1g2202 222 Gene3D Glutaredoxin 1 86 - -
Lja1g2202 222 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Lja1g2202 222 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 216 - -
Lja1g2202 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Lja1g2202 222 SFLD Glutathione Transferase (cytosolic) 5 220 IPR040079 -
Lja1g2202 222 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Lja1g2202 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 210 IPR010987 -
Lja1g2202 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 216 IPR045073 -
Lja1g2202 222 SFLD Main.3: Omega- and Tau-like 5 220 IPR045073 -
Lja1g2202 222 SUPERFAMILY GST C-terminal domain-like 79 213 IPR036282 -
Lja1g2202 222 Pfam Glutathione S-transferase, C-terminal domain 113 194 IPR004046 -
Lja1g2202 222 Coils Coil 121 141 - -
Lja1g2202 222 CDD GST_C_Tau 91 213 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2202 Lja-Chr1 25538832 25541858 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2202 5 220 Glutathione S-transferase Gene Family AT3G09270 50.000 1.24e-68 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2202 K00799 - gmx:548029 317.39