Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2177 ATGCTTAGAGGTGAGATAATGAAGTTAGATGAGGATTTGGGTCCTGATCGTGAGGATGACTTTCAAACAGATGATGAAGAAAACCAAGGACAAAGGGTGTTTGAAAATTTGGATGATCAAACCGATTCAGATAACTCACAAGCTCCTTCACGAAATTTATCCAACGAGGTTCCCCTTAGTCCTTCTTGGCCTCAAAGCTATAGACAATCTATGGACATGTTAACCAATGTAAGCGTAACGCCCCCTGGGCTTGGGCTTACTTTCCTACGGAGAATGAGCTCAACAGGGAGATCCAACTCTGCCTCTCAACAATACCAAGATGATTCCTCTTTGACGACACCTCTTGTTTCCGATAATGTTTCATCCAAACAGCCCCACCATGTTCAATCACTAGTATCTTCTAGTTGTACAAAATTTTCTGCAAGTGAACTGCCACCACCACAACAACAATGTTCATTTGCACAATCAGTGATTAATGATAGTGACTCTGGACTCAAAGCTTACCCAGATATTGGTCAGGCTGCTTTTGGAATTTTTGGTCGCCTTGGGATTTCAATTGTTTTGTACATGGAACTGTTTGCCTCTTGTGTTGAGTACATAACATTATTCAGTGATAACCTGGAATCAATGTTTCCTAACACCAACATCAGATTTGCTGGGACTAACTTGGGTACTCATCAAATATATGCCATCACAGCGGCTCTTCTTGTTCTACCAACGGTTTGGCTGCGAAATCTAAGTCTGCTTTCTTATATTTCAGTTGGAGGAATATTTGCATCAATACTTGTGACGTTTTGCTTATTTTGGGTTGGGGTGATAGACCAAGCTGGAGTTCAATTCAAGCCAGGAGGAAAACTTTTAGACCTTGCAAACATATCTGTCTCAATTGGTGTTTTTGGTTTTGGCTTTGCTGGCCATGCAGTGTTTCCAAACATCTACTCTTCCATGAAGGAACCATCAAAATTCCCATCAGTTATATACATTAGGTAA 990 0.4091 MLRGEIMKLDEDLGPDREDDFQTDDEENQGQRVFENLDDQTDSDNSQAPSRNLSNEVPLSPSWPQSYRQSMDMLTNVSVTPPGLGLTFLRRMSSTGRSNSASQQYQDDSSLTTPLVSDNVSSKQPHHVQSLVSSSCTKFSASELPPPQQQCSFAQSVINDSDSGLKAYPDIGQAAFGIFGRLGISIVLYMELFASCVEYITLFSDNLESMFPNTNIRFAGTNLGTHQIYAITAALLVLPTVWLRNLSLLSYISVGGIFASILVTFCLFWVGVIDQAGVQFKPGGKLLDLANISVSIGVFGFGFAGHAVFPNIYSSMKEPSKFPSVIYIR* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2177 329 MobiDBLite consensus disorder prediction 40 66 - -
Lja1g2177 329 PANTHER OS05G0424000 PROTEIN-RELATED 160 328 - -
Lja1g2177 329 MobiDBLite consensus disorder prediction 1 15 - -
Lja1g2177 329 MobiDBLite consensus disorder prediction 95 124 - -
Lja1g2177 329 Pfam Transmembrane amino acid transporter protein 153 325 IPR013057 -
Lja1g2177 329 MobiDBLite consensus disorder prediction 1 66 - -
Lja1g2177 329 PANTHER AMINO ACID TRANSPORTER AVT1F-RELATED 160 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2177 Lja-Chr1 25282321 25284074 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2177 7 328 Amino Acid or Auxin Permease AAAP Family AT5G02180 41.902 1.88e-85 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2177 K15015 - pop:7468814 317.005