Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2170 ATGGGTATGGCTACACGTGTCCCCTTTGTCTCCGCTACCCTTTCTCCCAACCAATGTCATAAATACTGCTTACCTTCCTCATTAAAGCTGCTGACCTCTCTTCAATTTTCTCATTCTTCTTCACTGTCACTTGCAACACACAAGAGGGTGAGAACTAGAACCAGTGTTGTAGCCATGGCTGACTCATCCAGGAGCACTGTGCTTGTTACTGGAGCTGGGGGTCGCACAGGAAAAATTGTTTATAAAAAATTACAAGAGAGGTCAAGCCAATATATAGCTAGAGGTCTGGTTCGAACAGAAGAAAGTAAACAGACAATTGGTGCTTCGGATGATGTTTATGTTGGGGATATCAGAGACACTGGAAGTATTGCTCCTGCAATTCAAGGGATAGATGCTCTCATAATCCTAACAAGTGCAGTGCCACTAATGAAACCTGGGTTTAATCCAACCAAAGGTGAAAGGCCAGAGTTCTATTTTGAAGATGGTGCATACCCTGAACAGGTGGACTGGATTGGGCAGAAAAATCAAATAGATGCTGCTAAGGCTGCAGGAGTTAAACAGATTGTGTTGGTGGGTTCTATGGGTGGAACAGACCTTAACAATCCTTTGAATAGCTTGGGCAATGGAAATATATTGGTTTGGAAAAGAAAGGCTGAGCAATATCTGGCTGATTCTGGTATTCCATACACGATTATAAGGGCTGGTGGGTTACAAGACAAAGAGGGAGGTGTTCGGGAACTCATCATAGGGAAGGATGATGAGATTCTCAAGACTGAAACCAGAACCATAGCTAGACCGGATGTTGCTGAAGTCTGTATTCAGGCACTAAATTTTGAGGAGGCCCAATTTAAGGCATTTGACTTGGCATCAAAACCTGAGGGTGCAGGTACACCAACAAGGGACTTCAAGGCTTTGTTCTCGCAGATCACTACTCGTTTTTGA 942 0.4384 MGMATRVPFVSATLSPNQCHKYCLPSSLKLLTSLQFSHSSSLSLATHKRVRTRTSVVAMADSSRSTVLVTGAGGRTGKIVYKKLQERSSQYIARGLVRTEESKQTIGASDDVYVGDIRDTGSIAPAIQGIDALIILTSAVPLMKPGFNPTKGERPEFYFEDGAYPEQVDWIGQKNQIDAAKAAGVKQIVLVGSMGGTDLNNPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGVRELIIGKDDEILKTETRTIARPDVAEVCIQALNFEEAQFKAFDLASKPEGAGTPTRDFKALFSQITTRF* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2170 313 CDD SDR_a5 66 288 - -
Lja1g2170 313 Gene3D - 63 313 - -
Lja1g2170 313 PANTHER NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED 36 313 IPR044163 GO:0016491
Lja1g2170 313 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 65 291 IPR036291 -
Lja1g2170 313 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 36 313 - -
Lja1g2170 313 Pfam NAD(P)H-binding 71 277 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2170 Lja-Chr1 25222931 25227980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2170 59 200 Monolignol Biosynthesis Gene Families AT2G33590 29.333 9.38e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2170 - - vra:106754550 491.886