Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2167 ATGGAAGCCACTTCCATAAGGCAGCTTTTGAAGGGCTTTTGTGATAATATGCAATGGAAATATGGTGTCTTTTGGAAGCTCAACGACTGTTTTCCATTGACTTTGACCTGGGAAACTGGTTATGAGAAAAGAAATGAGGCTATGGAAAGCATGTGGAGTGACATCAATTTAAAATCCCCAGTTGAAGTACATTCTTCAGGAGATTGTTCAGCTCAACTTTTCATGATTGAAATGTGTAATCGTAAATACAGATTGGGAGAAGGAATTATTGGCAAAATACCTCTTGCCAGGGATCACTTTTGGGTTTTATGTGAGGATATTCTGACCAATAAATTTGACACTGATTTAATCTCTGAGTGTCCTGATGAGTGGCTTCTCCAATTTGCGTCTGGCATCAAGACTATTGTGCTGGTACCAGTTCTTCCACAAGGGGTTTTGCAATTTGGTTCATTTGAAGCGGTTGCTGAAGACATAGAATTTGTTACCAATATTACGAAGCAATTCCACTCCATTCATTGTCTGGAAGCAAATACTAACTCAGGAATTGATTTTCAAGATTGGTCATTCTCTGCCCTATCACATGATTTGATCGATAGCCTAGATGAATCATCTTCGTATACAAATACTATACTGAATGGTGAAGTCTCAGCCAGTGCTTCCCTCAATGCAAATGAACCAACAAGGCTGCATCCAACAATGCTATCATTTATTCAGGATGACCGCTGCATGTTGAGAGAAAACCAACTCAAATCTCTGAAGAGGTCAAATGAAAATGAGATATTTTCGTCATCAATTGAGATGTCAACTGATCCACGACATATTGGTCACGTGGAGAGAAAACCAAACCATAAAGATGAGATATGGGCGCAGACTCACTTGGTACAAACTGCGGGAGCGTTTGGAGAGATTTCCAATGGATTGAATTCTTACCCTGGTAAAAATATGACAGAGCAACAATTTGGAGGCATGGAAACTGGTCATGATGATATTGAGAATGTGAATGACTTCTTCACTTTTCCCTCAGAGTGTGAATTGCACAAAGCACATCAATCCGTTTCATATGACAAGACAGGCAAATCAGTGCAAAAATATATCTCTGTTGATGGTTCATGCAGCAGCTCAACTTTAATATCGATTGTAAAAGAGCATGATCATGATAAAGGTTTGGAGTTTCCTGAAGAAGTAGATCCAGAATATCTTCTGGATGCTGTTTTTGGCAATTTATGCAGCGCCTCTGATGATACTACAAGTATATCCAACAGTGTTAGGTCTCTTGTAACCATGCCAATAGAGTTCACTGGTTCCATTCAGCCAAAATTTGATCCTGAATCTAGCAGTTTGGTTGTGAATAATTCAGATGGGAGGAGTGATCTTATACCTAGGATCAAGAGTAAAGATGAAATTGCTAAGCATTTAACATCACCATCTTTTGTTGGAAATTCAAGCTTATTAATGATTGATGAGACACGTAAGGAAAAGGTTAACAGTCATAGGCAACCTATTAGTGTACCAAAAAACTCTAGTACAACCAAAAAAAGAGCAAGAGTCGATAATAACCGAAAGCCAAGACCAAGAGATAGACAGATGATCATGGACAGGATGAAGGAGTTGAGGGAACTTATCCCTGATGGTGGTAGGTGTAGCATTGACAACCTCTTGGAACGGACCATAAAACACATGATGTACTTGAGAAAGATAACAAGCCAGGCTGAGAAACTGAAACGATTTGCAGATCAAGAGGTTCCTAAGTGGAAAAAACAGAAAATCAATGGCAGTTATCCAGGAAGGAGCTGTGCATTTGATTTTGAAAGTGAACTAGCATGGCCCATAGTTATAGAGGATCTAGAATGCACTGGTCACATGCTCATAGAGATGGTATGCAATGAGCATGGACTTTTCTTGGAGATTGTTCAGGTGATCCGGAAGCTGGACATTACTATCATGAAAGGGATTTTAGAAAACCGTTCAAACACCAGCTGGGCTTGTTTCATCATTGAGGTTCCAAGAGGTTTTCACAGGATGGATGTTTTATGTCCTTTATTGCATCTGCTGCAGCTTAGAGGAAACCCTGTCTCTGAAAGCTGA 2085 0.3971 MEATSIRQLLKGFCDNMQWKYGVFWKLNDCFPLTLTWETGYEKRNEAMESMWSDINLKSPVEVHSSGDCSAQLFMIEMCNRKYRLGEGIIGKIPLARDHFWVLCEDILTNKFDTDLISECPDEWLLQFASGIKTIVLVPVLPQGVLQFGSFEAVAEDIEFVTNITKQFHSIHCLEANTNSGIDFQDWSFSALSHDLIDSLDESSSYTNTILNGEVSASASLNANEPTRLHPTMLSFIQDDRCMLRENQLKSLKRSNENEIFSSSIEMSTDPRHIGHVERKPNHKDEIWAQTHLVQTAGAFGEISNGLNSYPGKNMTEQQFGGMETGHDDIENVNDFFTFPSECELHKAHQSVSYDKTGKSVQKYISVDGSCSSSTLISIVKEHDHDKGLEFPEEVDPEYLLDAVFGNLCSASDDTTSISNSVRSLVTMPIEFTGSIQPKFDPESSSLVVNNSDGRSDLIPRIKSKDEIAKHLTSPSFVGNSSLLMIDETRKEKVNSHRQPISVPKNSSTTKKRARVDNNRKPRPRDRQMIMDRMKELRELIPDGGRCSIDNLLERTIKHMMYLRKITSQAEKLKRFADQEVPKWKKQKINGSYPGRSCAFDFESELAWPIVIEDLECTGHMLIEMVCNEHGLFLEIVQVIRKLDITIMKGILENRSNTSWACFIIEVPRGFHRMDVLCPLLHLLQLRGNPVSES* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2167 694 MobiDBLite consensus disorder prediction 510 527 - -
Lja1g2167 694 MobiDBLite consensus disorder prediction 491 527 - -
Lja1g2167 694 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 7 168 IPR025610 -
Lja1g2167 694 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 514 563 IPR011598 GO:0046983
Lja1g2167 694 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1 1 693 - -
Lja1g2167 694 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 693 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2167 Lja-Chr1 25197688 25209414 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2167 397 689 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 36.478 3.05e-46 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2167 - - lja:Lj1g3v3444270.1 1096.26