Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2152 ATGGCTTCCAGTGCCAGATTCAGCTATTCATATATCCTTGCACTCTTCTTCTTGCCCTTCATTTCTTTCACTTTCCATGCCAATTCAATTCACTTCAAATTTCCCAATTCCAGCCCTGGTGGTCCAAACATACGCTACCTAGGATCTGCAGGAAATATTGAAGGAGAAGTTGAATTTAACCTTTATGAAGCGTATATAAGTCAAGTTGGATGGGCAATCTATGCTCAAAAAGTGTTGCTTTGGGACTCAGACACAGGTCAACTCACTAACTTCACAACACATTACACCTTCATTATTGACACTAAAGGTCTATCTAGGTATGGTCATGGACTTGCCTTCTTCCTTGCTCCAGTTGGATTTGAAATCCCTCCAAATTCTGCTGGTGGCTTTCTTGGCCTATTCAACACAGCAACTATGTTTTCATCATCCCATAGCCAAATTGTTCATGTGGAGTTCGATTCATACCCAAATCCTGAATTTAATGAAACGGTGCAGCATGTGGGAATCAACAATAACTCAATTATTTCATCAAAATGGACACCATGGAATGCTAGCTTACACAGCACAGCCACTGCTGATGTATCAATTAGCTACAATTCTGCAACACAAAATTTATCAGTGTCATGGAAATACCAGACCACCTCTGATCCTGAAGAAAAACAAGTCTTTCGATTTTCCGCAGCAACAGGTACGGTCACCGAAAAGCATAATCTTCTATCATGGGAGTTCAACTCCACATTGGAAAGTAGTAGTGAAAGTAATACAAAGAAGACAAGATTAGTTGCGATTGTACCTGTTTCTTGTGGTGTTATAGTACTGCTGGCCATAATTGCAATTGCAACATATGCATTATTTTGGAGGAAGAGAAAGAAAAACAGAAAAGAAGAAACCATCAATTTAACATCAATCAATGATGATGACATTGAAAAAGGAGCAGGGCCAGGGAGATTCTCCCACATAGAACTCGCTTCCGCTACCAATAACTTCTCCAGAGACCGGAAACTCGGCCAAGGAGGTAAGAGCCTAACACGCCTCGCTTGGAGCGTGAGGCACAAGATAGCTCTTGGATTGGCCTCTGCAGTGCTTTATTTACATGAAGAATGGGAAAGATGTGTGGTCCATAGAGATATCAAGTCAAGCAATGGTATGCTAGATTCTAGTTTTAATGTGAAACTTAGTGACTTTGGACTGGCGAAGCTCATGGACCATGAACTGGGCCCGCAAATAACTGGGCTTGCTGGAACATTGGGCTACATGGCTCCAGAATATGTGAGCACAGGAAGGGCAAGCAAAGAGTCAGATGTGTATAGCTTTGGGGTGGTTGCTTTGGAGATTACTACAGGGAAAAAAGCTGTTCATGTGATGGAAGATAGAGATGGAGATCAAAAGGGGTTGATTCAGTGGGTTTGGGATCATTATGGCAGAGGAGAGGTGGTTATGGCTATGGATGAGAGTTTGCAGAAGGATTTTGATTTGAAACAGGTTGAGTGTTTGATGATTGTTGGACTGTGGTGTTCTCACCCTGACGTAAATCTTAGACCGTCAATACGACAGGCAATTCAAGTGCTGAATTTCGAGGCTACCATGCCTAACCTTCCTCTAAAGAGGCCGGTCGCGACTCAATGCTCCTATACCATCTGTAAGCTCGGTAGAACCATCCATAACCACAAGCCTTCACATTGGTCATTGATTGATACCACCTCAACGATATCATGCTGGTTAAACTAA 1728 0.4242 MASSARFSYSYILALFFLPFISFTFHANSIHFKFPNSSPGGPNIRYLGSAGNIEGEVEFNLYEAYISQVGWAIYAQKVLLWDSDTGQLTNFTTHYTFIIDTKGLSRYGHGLAFFLAPVGFEIPPNSAGGFLGLFNTATMFSSSHSQIVHVEFDSYPNPEFNETVQHVGINNNSIISSKWTPWNASLHSTATADVSISYNSATQNLSVSWKYQTTSDPEEKQVFRFSAATGTVTEKHNLLSWEFNSTLESSSESNTKKTRLVAIVPVSCGVIVLLAIIAIATYALFWRKRKKNRKEETINLTSINDDDIEKGAGPGRFSHIELASATNNFSRDRKLGQGGKSLTRLAWSVRHKIALGLASAVLYLHEEWERCVVHRDIKSSNGMLDSSFNVKLSDFGLAKLMDHELGPQITGLAGTLGYMAPEYVSTGRASKESDVYSFGVVALEITTGKKAVHVMEDRDGDQKGLIQWVWDHYGRGEVVMAMDESLQKDFDLKQVECLMIVGLWCSHPDVNLRPSIRQAIQVLNFEATMPNLPLKRPVATQCSYTICKLGRTIHNHKPSHWSLIDTTSTISCWLN* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2152 575 SUPERFAMILY Protein kinase-like (PK-like) 340 534 IPR011009 -
Lja1g2152 575 PANTHER - 343 540 - -
Lja1g2152 575 PANTHER - 24 339 - -
Lja1g2152 575 Gene3D - 27 271 - -
Lja1g2152 575 PANTHER PUTATIVE-RELATED 24 339 - -
Lja1g2152 575 CDD lectin_legume_LecRK_Arcelin_ConA 30 247 IPR001220 GO:0030246
Lja1g2152 575 PANTHER PUTATIVE-RELATED 343 540 - -
Lja1g2152 575 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 260 IPR013320 -
Lja1g2152 575 Pfam Protein kinase domain 350 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g2152 575 Gene3D Transferase(Phosphotransferase) domain 1 333 545 - -
Lja1g2152 575 Pfam Legume lectin domain 30 257 IPR001220 GO:0030246
Lja1g2152 575 ProSiteProfiles Protein kinase domain profile. 241 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g2152 575 SMART serkin_6 241 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2152 Lja-Chr1 25037232 25040098 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2152 9 540 Receptor kinase-like Gene Family AT5G10530 37.285 2.97e-111 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lja1g2152 Lectin_legB 1e-44 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2152 - - pvy:116139784 523.857