Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2139 ATGGTGGCACCAGAATTCAATAGTGGTGGTGGCCTTGGTGGTTGGAGAGGAACAAAGACCTTCATCCACCGTGCTCTTACCAGCCGTTGGTTCATGCTATTTGCATGTTCACTAATCATGGCCGTTGGTGGGGCAACCTACATGTTTGGCCTATACTCCAACGTTGTCAAATCCTCTTTAGGCTACGATCAATCCACTCTGAACCTTCTCAGCTTCTACAAAGACCTTGGTGCCAATGTTGGAGTCATCTCCGGGCTAATCAACGAGGTCACGCCGCCATGGGTGGTGCTCTCAATTGGGATCATCATGAACTTCTTTGGCTACTTCATGATATGGCTCGCTGTCACAGGTGCAAATTCTCAAACTTTTGTAAGCACTGGTGCTTTGATCACATGTGTCAAGAATTTCCCTGGAAGCAGAGGCAGTGTTTTAGGCCTTCTCAAAGGTTATATTGGGCTAAGTGGTGCTATAATCACACAGTTTTACCATGCCTTGTATGGTGAAAATTCCCAATCTTTGATCTTGTTCATTGCTTATCTCCCTGCAGCTGTTTCCTCTATTTTTCTTCCAGCAATTAGGATGTTAAAATTAAACATTGCACAACAACAAAAAGAGCATAAAGTTTTGTACAATTTTCTTTATATGTCACTTGGCCTTGCTGGGGTTCTCATGGGGTTGATCATTGCTCAAAAAACATTGAGCTTTTCAAGGATTGAGTACATTGCTGCTGGAATTGGGGTTATGTTTCTGCTTTTTCTCCCACTTGCTCTAGTTTCCAGGGAGGAGTTCAAGCTCTTGAAGACCAAGTCCCAAGCTGTCACCAACCCATCTCAATTAAAAGTCAATATAGAACCACCAAAGGTTGTAGCAAAAAATTCTTGTTTGAGCACCATTTTGAAACCCCCAAAAAGGGGAGAAGACTACACCATTCTTCAAGCCCTGTTCAGTGTTGACATGTTGATTCTCTTCATAGCAACAACATTTGGTGCTGGTGGAACATTAGCTGCCATTGACAACCTAGGACAAATTGGGGACTCATTGGGATACCCGAGTAAGAGCACCACAACCTTTGTGTCCTTAGTGAGCATATGGAACTATCTTGGAAGAGTGGTTTCTGGTTATGCCTCTGAAATCTTATTAACCAAATACAGGTTCCCTCGTCCCTACATGCTAACTCTAGTTATGCTTCTATCTTGTGTTGGCCATGTTCTGATAGCCCTTGGTGTCCCAAATTCTCTCTACATTGCTTCAGTGATTATTGGGTTTTGTTTAGGGGCTCTATGGCCGTTAGTGTTTGTAATCATATCAGACATTTTTGGTTTGAAATACTACTCAACATTGTACAATTTTGGAGCTGCGGCAAGCCCTGTTGGATCTTACATACTAAGCGTGAGAGTGGCAGGGTATTTGTATGATAAAGAGGGTTTGAAGCAGTTGCACGCTAAGGGACTCACTAGAGAAGCAGGGAAAGACCTAATTTGTGTAGGAATAGAATGCTACAGGATGGCTTTTATCATCATCACTGCATCAACCCTGATTGGTTGTTTTGTTTCCCTCATTTTGGCTCTGAGGACTAGGAAATTTTACAAAGGTGGTGTTTACAGAAAGTTTAGGGAAGAAGTTGAAGTAGAGACTGAGATGGGGAGTGCCAAAACTGATGTTGTTCTTCCTGAAACAGAAGGCAAGGCAACCTTAAGCGCCACTGAGGCTATTCCTAGAACTACCACAAGTGGCTTTTAG 1740 0.4299 MVAPEFNSGGGLGGWRGTKTFIHRALTSRWFMLFACSLIMAVGGATYMFGLYSNVVKSSLGYDQSTLNLLSFYKDLGANVGVISGLINEVTPPWVVLSIGIIMNFFGYFMIWLAVTGANSQTFVSTGALITCVKNFPGSRGSVLGLLKGYIGLSGAIITQFYHALYGENSQSLILFIAYLPAAVSSIFLPAIRMLKLNIAQQQKEHKVLYNFLYMSLGLAGVLMGLIIAQKTLSFSRIEYIAAGIGVMFLLFLPLALVSREEFKLLKTKSQAVTNPSQLKVNIEPPKVVAKNSCLSTILKPPKRGEDYTILQALFSVDMLILFIATTFGAGGTLAAIDNLGQIGDSLGYPSKSTTTFVSLVSIWNYLGRVVSGYASEILLTKYRFPRPYMLTLVMLLSCVGHVLIALGVPNSLYIASVIIGFCLGALWPLVFVIISDIFGLKYYSTLYNFGAAASPVGSYILSVRVAGYLYDKEGLKQLHAKGLTREAGKDLICVGIECYRMAFIIITASTLIGCFVSLILALRTRKFYKGGVYRKFREEVEVETEMGSAKTDVVLPETEGKATLSATEAIPRTTTSGF* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2139 579 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 11 563 - -
Lja1g2139 579 SUPERFAMILY MFS general substrate transporter 213 527 IPR036259 -
Lja1g2139 579 PANTHER MFS TRANSPORTER 11 563 - -
Lja1g2139 579 Gene3D MFS general substrate transporter like domains 296 528 IPR036259 -
Lja1g2139 579 CDD MFS_Mch1p_like 28 515 - -
Lja1g2139 579 Pfam Major Facilitator Superfamily 324 521 IPR011701 GO:0022857|GO:0055085
Lja1g2139 579 Pfam Nodulin-like 29 257 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2139 Lja-Chr1 24886395 24888217 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2139 19 540 Nodulin-like Gene Family AT2G39210 59.857 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2139 - - gmx:100818752 775.393