Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2133 ATGGCGGTTCCAAAGCTTTTCTTCTTCTTCTTCTTCTTCTTCTTTTTCATTTACTTCTGCAAAGCTAGTAGTACCACCTCCACAAAGGCCGTGTTGTCTTCTTCCTCTGAGGTTGGTCTTCTCTTGAGTAAAATCAGAGCTTCACTGCAAGGCAACGCAGAAAACCTCGTTTTGTCTTCGTGGAACTCCTCTATTCCACTTTGCCAGTGGAGAGGGCTCAAGTGGGTTTTCTCCAATGGCTCTCCTCTCTCATGCAGTGACTTGTCTTCACCACAATGGACCAATCTTTCACTTCACAAGGACCCTTCTGTGCACTTGCTCTCTCTTCAGCTCCCATCTGCAAATCTCACTGGTTCACTCCCCAGAGAGCTTGGTCAGTTCCCTCTGCTTCAGAGTCTCTATCTCAACATCAATTCATTGACAGGAACAATCCCTCTTGAGCTTGGTTACAGCACCTCCCTCTCTGACATTGATTTCAGTGACAACTTGCTCACTGGATCTCTTCCCCCTTCTATCTGGAACTTGTGTCAGAGGCTTGTTTCAATTAGACTCCATGGGAACTCACTCTCTGGCTCTGTTTCTGGACCAGCATTGCCTGACTCTTCTACTTGCAAGAATTTGCAGTTTCTTGATTTGGGTAGCAACAAGTTTTCTGGGAATTTTCCTGAGTTCATCACCAAGTTTGGTGGTCTAAAACAGCTTGACCTGGGGGGTAACATGTTTACAGGTACAATTCCTCAAAGCTTGGTTGGGCTAAAGCTTGAAAAGTTGAATCTTTCACACAATAACTTTAGTGGGGTTTTGCCTTTTTTGGGAGAATCCAAATTTGGGGTTGATGCTTTTGAAGGGAATAGCCCTGACTTGTGTGGACCACCTTTGAAAAGCTGTACTAGTAACTCTGGACTGAGTTCTGGTGCTGTTGCTGGTATTGTTATCAGTCTGATGACTGGAGCTGTGGTTTTTGCTTCTTTGCTGATTGGGTATATGCAGAACAAGAAGAGGAAGGGAAGTGGAGAGAGTGAAGATGAATTGAATGATGAAGAGGAGGAGGATGAAGAACATGGAGCTGGCGGGGGCGGCGGAGCCGGTGAGGGGAAGCTTATGTTGTTCCCTGGAGGTGAGAATTTGACATTAGAGGATGTGTTGAATGCAACTGGGCAAGTTATGGAGAAGACATGTTATGGGACAGCTTATAAGGCAAAACTTGCTGATGGAAACACCATTGCTTTGAGGTTATTGAGGGAAGGTAGCTGCAAGGATAGGACTTCATGCTTGTCAGTCATAAAGCAATTGGGGAAAATTCGCCATGAGAATTTGATTCCTTTGAGAGCTTTCTATCAGGGAAAGAGAGGGGAGAAGCTACTTATTTATGACTATCTGCCTCTCAGAAGCCTTCATGATCTTTTACATGAAACTAAACAAGGAAAGCCAGTGCTGAACTGGGCTAGGCGACACAAGATTGCGTTGGGGATAGCAAGAGGGCTAGCTTATCTTCATACAGGGCTCGATGTTCCTGTCACACATGCAAATGTAAGATCCAAGAATGTGCTTGTGGATGACTTCTTTATTGCCAGGCTCACTGATTTCGGCCTCGACAAGCTGATGATTCCATCCGTAGCTGACGAGATGGTGGTGGTTGCGAAGACAGACGGGTACAAGGCTCCCGAGCTTCAAAAAATGAAGAAATGCAACTCCAGGACGGACGTTTACGCCTTCGGCATACTACTGCTGGAAATCCTGATTGGGAAGAAGCCAGGGAAGAATGGAAGAAATGGCGCCATGGTTGTAGATTTGCCTTCAATGGTGAAAGTGGCAGTGTTGGAGGAGACAACAATGGAAGTGTTTGATGTGGAGATCTTGAAAGGGATAAGAAGTCCAATGGAAGATGGGTTGGTGCAGGCACTGAAGCTGGCAATGGGGTGTTGTGCACCAGTGGCATCTGTTAGGCCCAGCATGGAGGAAGTTGTGAGGCAGTTGGAGGAGAATAGACCAAGGAACAGGTCTGCTCTGTACAGCCCTACAGAGACAAGAAGTGGAAGTGTCACCCCATTTTGA 2055 0.4623 MAVPKLFFFFFFFFFFIYFCKASSTTSTKAVLSSSSEVGLLLSKIRASLQGNAENLVLSSWNSSIPLCQWRGLKWVFSNGSPLSCSDLSSPQWTNLSLHKDPSVHLLSLQLPSANLTGSLPRELGQFPLLQSLYLNINSLTGTIPLELGYSTSLSDIDFSDNLLTGSLPPSIWNLCQRLVSIRLHGNSLSGSVSGPALPDSSTCKNLQFLDLGSNKFSGNFPEFITKFGGLKQLDLGGNMFTGTIPQSLVGLKLEKLNLSHNNFSGVLPFLGESKFGVDAFEGNSPDLCGPPLKSCTSNSGLSSGAVAGIVISLMTGAVVFASLLIGYMQNKKRKGSGESEDELNDEEEEDEEHGAGGGGGAGEGKLMLFPGGENLTLEDVLNATGQVMEKTCYGTAYKAKLADGNTIALRLLREGSCKDRTSCLSVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDYLPLRSLHDLLHETKQGKPVLNWARRHKIALGIARGLAYLHTGLDVPVTHANVRSKNVLVDDFFIARLTDFGLDKLMIPSVADEMVVVAKTDGYKAPELQKMKKCNSRTDVYAFGILLLEILIGKKPGKNGRNGAMVVDLPSMVKVAVLEETTMEVFDVEILKGIRSPMEDGLVQALKLAMGCCAPVASVRPSMEEVVRQLEENRPRNRSALYSPTETRSGSVTPF* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2133 684 Gene3D Transferase(Phosphotransferase) domain 1 461 676 - -
Lja1g2133 684 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 1 684 - -
Lja1g2133 684 MobiDBLite consensus disorder prediction 660 684 - -
Lja1g2133 684 SUPERFAMILY Protein kinase-like (PK-like) 392 660 IPR011009 -
Lja1g2133 684 MobiDBLite consensus disorder prediction 334 362 - -
Lja1g2133 684 MobiDBLite consensus disorder prediction 665 684 - -
Lja1g2133 684 Pfam Leucine rich repeat 206 264 IPR001611 GO:0005515
Lja1g2133 684 Gene3D Ribonuclease Inhibitor 40 176 IPR032675 -
Lja1g2133 684 ProSiteProfiles Protein kinase domain profile. 383 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja1g2133 684 PANTHER KINASE-LIKE PROTEIN TMKL1-RELATED 1 684 - -
Lja1g2133 684 Gene3D Phosphorylase Kinase; domain 1 371 459 - -
Lja1g2133 684 SUPERFAMILY L domain-like 72 269 - -
Lja1g2133 684 Gene3D Ribonuclease Inhibitor 177 298 IPR032675 -
Lja1g2133 684 Pfam Protein tyrosine and serine/threonine kinase 391 659 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2133 Lja-Chr1 24837009 24840368 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2133 7 684 Receptor kinase-like Gene Family AT3G24660 73.599 0.0 937
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lja1g2133 PK_Tyr_Ser-Thr 1.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2133 - - gmx:100814814 1098.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2133 1 24837009 24840368 Lja1g2133 1 24837009 24840368 ECH