Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja1g2114 | ATGAGCTGCTTTTCATGTTTTTCTTCCCACGATAAAAAGGTAGCAAAGAGGCCTAATAATAACAATGGAAGGAGGATACAACCTCCTGCTGTTCAATCTCCTAAGGGAGCAGCCCCACCTCAGCCAGAGAATCATTATCACAAGGCAAGGGCAAAGCCACCAACAGATCCAAAAATAAACAGAGAGGCCAATAAAGATACTGGGAACAATAACAACAACATTGCTGCCCAAACGTTCACCTTCAGGGAATTGGCTGTTACTACAAAGAACTTCAGGCAGGAGAATCTAATAGGTGAAGGTGGATTTGGGAGGGTTTATAGAGGAAAACTTGAAAAAACAAACCAGGAAGTAGCTGTGAAGCAACTTGACAGGAATGGATTGCAAGGGAACAGAGAATTTCTTGTTGAAGTGTTAATGCTGAGCCTCTTGCACAATCAAAATCTAGTGAATTTAATTGGATATTGTGCTGATGGAGATCAGAGGTTGTTGGTTTATGAGTACATGCCTTTGGGATCTCTTGAGGACCACCTACTTGATCTTCATCCACAACAAAAGCCTCTAGATTGGTTCACGAGAATGAAAATAGCTTTGGATGCTGCAAAAGGTCTAGAATATTTGCATGACAAGGCGAATCCCCCGGTGATCTACCGCGACTTAAAGTCTTCCAACATCTTGCTGGACAATGATTTCAATGCAAAGCTCTCTGATTTTGGACTAGCGAAGCTGGGACCAACAGGGGACAAGTCTCATGTGTCTTCAAGAGTAATGGGAACTTATGGATATTGTGCCCCTGAGTATCAAAGAACTGGACAGCTCACTGTGAAATCAGATGTGTACAGCTTTGGAGTAGTTTTGCTCGAATTGATCACAGGAAGGAGAGCCATTGACAACACAAGATCAGCAAGGGAACAGAACCTAGTTTCTTGGGCATATCCAGTATTCAGGGACCCTCATAGATACCCAGAATTAGCAGATCCCATTCTTGAAGGAAACTTTCCAATGAGATCACTACACCAAGCAGTGGCAGTAGCAGCCATGTGCCTGAATGAGGAGCCCTCAGTGAGGCCCTTGATCAGCGACGTCGTGACTGCTCTTAGCTTCCTTGGGAGAACTCCAGGGAGCCAAGACCCTGTAAGAATCGCACCTGTTGATATGCCCTCCCCAAAACATGAGCCAGAGCAACTACAAGACGACACTACTAGTGCCACATTGAATCTTCTTGACAATGATAGTGCCATGGAACGCCAAAAAGCAGTTGATGAAGCCATTGAATGGGGTTCAAATTCTAGGAACAATAAACCAGCGCGTCGTGACAGTTCTTCCTCTTTGTAA | 1332 | 0.4437 | MSCFSCFSSHDKKVAKRPNNNNGRRIQPPAVQSPKGAAPPQPENHYHKARAKPPTDPKINREANKDTGNNNNNIAAQTFTFRELAVTTKNFRQENLIGEGGFGRVYRGKLEKTNQEVAVKQLDRNGLQGNREFLVEVLMLSLLHNQNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLLDLHPQQKPLDWFTRMKIALDAAKGLEYLHDKANPPVIYRDLKSSNILLDNDFNAKLSDFGLAKLGPTGDKSHVSSRVMGTYGYCAPEYQRTGQLTVKSDVYSFGVVLLELITGRRAIDNTRSAREQNLVSWAYPVFRDPHRYPELADPILEGNFPMRSLHQAVAVAAMCLNEEPSVRPLISDVVTALSFLGRTPGSQDPVRIAPVDMPSPKHEPEQLQDDTTSATLNLLDNDSAMERQKAVDEAIEWGSNSRNNKPARRDSSSSL* | 444 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja1g2114 | 443 | ProSitePatterns | Protein kinases ATP-binding region signature. | 97 | 120 | IPR017441 | GO:0005524 | |
Lja1g2114 | 443 | SUPERFAMILY | Protein kinase-like (PK-like) | 77 | 399 | IPR011009 | - | |
Lja1g2114 | 443 | CDD | STKc_IRAK | 97 | 365 | - | - | |
Lja1g2114 | 443 | PANTHER | SERINE/THREONINE-PROTEIN KINASE PBL26-RELATED | 2 | 435 | - | - | |
Lja1g2114 | 443 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 214 | 226 | IPR008271 | GO:0004672|GO:0006468 | |
Lja1g2114 | 443 | MobiDBLite | consensus disorder prediction | 425 | 443 | - | - | |
Lja1g2114 | 443 | SMART | serkin_6 | 91 | 368 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lja1g2114 | 443 | Gene3D | Phosphorylase Kinase; domain 1 | 60 | 167 | - | - | |
Lja1g2114 | 443 | PANTHER | OS07G0668900 PROTEIN | 2 | 435 | - | - | |
Lja1g2114 | 443 | ProSiteProfiles | Protein kinase domain profile. | 91 | 368 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lja1g2114 | 443 | MobiDBLite | consensus disorder prediction | 45 | 63 | - | - | |
Lja1g2114 | 443 | MobiDBLite | consensus disorder prediction | 375 | 400 | - | - | |
Lja1g2114 | 443 | Pfam | Protein kinase domain | 92 | 362 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lja1g2114 | 443 | MobiDBLite | consensus disorder prediction | 1 | 74 | - | - | |
Lja1g2114 | 443 | Gene3D | Transferase(Phosphotransferase) domain 1 | 168 | 375 | - | - | |
Lja1g2114 | 443 | MobiDBLite | consensus disorder prediction | 421 | 443 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja1g2114 | Lja-Chr1 | 24558386 | 24561403 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja1g2114 | 1 | 430 | Glycoside Hydrolase | AT3G07070 | 66.282 | 0.0 | 557 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-1 | Lja1g2114 | Pkinase | 4.4e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja1g2114 | - | - | gmx:100786405 | 731.48 |