Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2084 ATGCTCGACACACAAAGCTACCTTCTATTGTTCTTCCTATGGTTCATATCCACCATTTTAATCAGGTCCATCTTCAAGAAATCCCAATGTTATAAACTACCCCCTGGCCCACCAATTTCCTTGCCTCTCATAGGGCATGCTCCTTATCTCCGATCACTCCTTCACCAAGCACTCTACAACCTCTCCCACAAGTATGGGCCTTTGATGCATATCTTACTCGGTTCCAAGCATGTCATAGTTGTATCCTCGGCAGAAATGGCGAAGCAGATCCTCAAGACTTCTGAAGAGTCCTTCTGCAACCGCCCTATTATGATCGCAAGTGAGAATCTCACATATGGTGCTTCTGACTACTTCTTCATCCCTTACGGAACTTACTGGCGCTTCCTCAAGAAGCTCTGCATGACAGAGCTTCTCAGCGGGAAGACTCTCGAGCACTTTGTCAGCGTTCGTGAGAACGAGATTCAAGCTTTCCTTAAAACGATTTTGGAGATATCAAAAACAGGTGAAGCCGTGGTGATGAGGCAAGAACTCATAAGGCACACCAACAACGTCATTTCAATGATGACTATGGGGAAGAAGAGTGAAGGATCAAAAGATGAAATTGGCGAGTTGAGAAAGGTGATTAGGGAAATTGGAGAGTTACTTGGATCTTTTAACTTGGGTGACATCATTGGGTTCATGAGGCCTCTGGATCTTCAAGGATATGGGAAGAAGAACAAGGACATGCATAGAAAATTGGATGGGATGATGGAGAAGGTGCTGAAAGAGCATGAAGAGGCAAGGGCCACGGAGGGTGCTGATAGTGATAGGAAGAAGGATCTTTTTGACATTCTGTTAAACTTGATTGAAGCAGATGGTGCTGATAATAAACTCACTCGTGATAGTGCCAAAGCCTTCGCTCTGGACATGTTTCTTGCTGGGACAAACGGCCCTGCAAGCGTGTTAGAGTGGTCACTAGCAGAGCTCATAAGAAACCCACACGTTCTCAAAAAGGCCAGAGAAGAAATAGACACTGTTGTTGGCAAAGAAAGACTAGTTAAAGAATCAGACATCCCAAACTTACCATATCTCCAAGCAGTAGTGAAAGAAACTCTCAGAATGCACCCACCAACTCCAATCTTCGCAAGAGAAGCCATGAGAAGTTGCCAAGTGGATGGCTACGATATCCCCGCGAACTCGAAGATTTTCATAAGCGCTTATGCAATTGGCAGGGACTCACAGTACTGGGAGAACCCGCATGTGTATGACCCTGAGAGATTCTTGTTCACTGATGAGCGTAAGGTTGATGTGAGGGGGCAATATTACCAACTCTTACCTTTTGGCAGTGGTAGAAGAAGCTGCCCTGGTGCTTCTCTCGCATTGATTGTTATCCAAGCTTCACTGGCGAGTTTGGTTCAGTGCTTTGATTGGGTTGTGAATGATGGGAAGAGTAATGAGATTGATATTGCAGAGGAAGGTAGAGTCACTGTGTTTCTGGCTAAGCCACTCAAGTGTAAGCCTGTTCCTCGTTTTGTTCCATTCTCTGTCTGA 1530 0.4529 MLDTQSYLLLFFLWFISTILIRSIFKKSQCYKLPPGPPISLPLIGHAPYLRSLLHQALYNLSHKYGPLMHILLGSKHVIVVSSAEMAKQILKTSEESFCNRPIMIASENLTYGASDYFFIPYGTYWRFLKKLCMTELLSGKTLEHFVSVRENEIQAFLKTILEISKTGEAVVMRQELIRHTNNVISMMTMGKKSEGSKDEIGELRKVIREIGELLGSFNLGDIIGFMRPLDLQGYGKKNKDMHRKLDGMMEKVLKEHEEARATEGADSDRKKDLFDILLNLIEADGADNKLTRDSAKAFALDMFLAGTNGPASVLEWSLAELIRNPHVLKKAREEIDTVVGKERLVKESDIPNLPYLQAVVKETLRMHPPTPIFAREAMRSCQVDGYDIPANSKIFISAYAIGRDSQYWENPHVYDPERFLFTDERKVDVRGQYYQLLPFGSGRRSCPGASLALIVIQASLASLVQCFDWVVNDGKSNEIDIAEEGRVTVFLAKPLKCKPVPRFVPFSV* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2084 509 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2084 509 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2084 509 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2084 509 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2084 509 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2084 509 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2084 509 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2084 509 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2084 509 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2084 509 PANTHER BETA-AMYRIN 24-HYDROXYLASE 3 508 - -
Lja1g2084 509 Pfam Cytochrome P450 34 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2084 509 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 508 - -
Lja1g2084 509 Gene3D Cytochrome P450 25 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2084 509 SUPERFAMILY Cytochrome P450 31 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2084 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Lja1g2084 509 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2084 509 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2084 509 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g2084 509 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2084 Lja-Chr1 24123582 24127371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2084 1 503 Cytochrome P450 AT5G06900 39.567 6.58e-132 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2084 K24188 K15814 gmx:100037459 835.869