Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2081 ATGGATAAGATTGAACTAGTTGAGAAAATTGTAATTGTTCCTGAGACACCAACACCCCCCAAGCGAATGTTCTTGTCAAACATTGATCTCTCCCTTGTTGTTTATCAAGACTCTGCCTCCTTTTTTGATCCTCCAAGCAACCAAATCAACTTTTCTGAGATCTATGGAAAACTATACAGAGCACTTAGTAAAATGCTTCTGCATTATGACTTTATGGCTGGTCGTCTCGTGCCGAGTTTGGACCAGAATGATAGGTTTGAAATAGATTGTAACGACGCAGGTATTGTGGTTGCTGCTGCAAGAACTCACAAAAAGTTAGCTGAATTTGGAATGATTTCTGCACCTAATCCGAAGCTAAGGGAGTTGGTTTTTTTCTTGTATGAAGATGATGAAGAAGAAACTGATCTGAAAGATAAGCCTCTTGCATCCTTACAGCTGACACAATTTGGATGTGGAAGTTTGGCACTTGCTTCTCACTACAACCATTGCATACTAGATGGTATAGCAATCAAAGAATTTGAGGAGAATTTGGCTGCTTTAACACGGGGTGATGACCTCATCATAGTACCTAATGCTGATAGAACATTGTTGAGAGCTAGAGACCCTCCAATGATAAGTCATCCACATTTTGAGTATTCAAAATCAACTGAGATTCAAGACTTGTTCACAGTACGTGGTAAAAGCCGCACCAATTTCAGACAATCCCTTGCAGAAAACCAAATTCATGTGCTTTACTTGTCACCCCAAAACATCACCAGTTTCAAAAAGGAAGCTCTGAAGAACAAAAACTTAAAGAACGTCTCCACTTTTCAAGTCATTGCTGCGAAAATATGGAAGGCGAGAAGCATTGCAACAAATATGCCAGAGGATAAGATATCAACAATGCTATTTCCAGTGGATGTTAGAAAAAAGGTCGTTCCTGAGCTTCCAGATGGGTTTGCAGCCACTGTGAAGGAGCTAGTGGAATTAGAAGATGGTTGTCACATAAGGAAAGTGCAAGAAGGGATTGAAAGGTTGGATGATAAGTACATTAAGTCAAGTCTTGATTGGTTAGAGGTAAACAAAGGAGTGCCTTGTATGGATGACAGTTTCTCCTTGGTGGCATGGTGGAGATTGGGGCTAGAGGAGCAAAATTTTTCCTGGGGGAGATTAAAATGTGCCACACCACTTACAGTTAAGCCTGGTTTGGTCATGCTGTTGCCAGGGCCAGTTGATAAAGGGGGTCTTAATGTGTGCCTGAATTTACCGGAGGATCAAATGCAAGAGTTTTGTAGGATAATGCTCGAAACTTAG 1293 0.4091 MDKIELVEKIVIVPETPTPPKRMFLSNIDLSLVVYQDSASFFDPPSNQINFSEIYGKLYRALSKMLLHYDFMAGRLVPSLDQNDRFEIDCNDAGIVVAAARTHKKLAEFGMISAPNPKLRELVFFLYEDDEEETDLKDKPLASLQLTQFGCGSLALASHYNHCILDGIAIKEFEENLAALTRGDDLIIVPNADRTLLRARDPPMISHPHFEYSKSTEIQDLFTVRGKSRTNFRQSLAENQIHVLYLSPQNITSFKKEALKNKNLKNVSTFQVIAAKIWKARSIATNMPEDKISTMLFPVDVRKKVVPELPDGFAATVKELVELEDGCHIRKVQEGIERLDDKYIKSSLDWLEVNKGVPCMDDSFSLVAWWRLGLEEQNFSWGRLKCATPLTVKPGLVMLLPGPVDKGGLNVCLNLPEDQMQEFCRIMLET* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2081 430 Gene3D - 237 429 IPR023213 -
Lja1g2081 430 Pfam Transferase family 3 423 - -
Lja1g2081 430 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE-LIKE ISOFORM X1 2 429 - -
Lja1g2081 430 Gene3D - 2 214 IPR023213 -
Lja1g2081 430 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2081 Lja-Chr1 24079019 24080881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2081 3 429 Monolignol Biosynthesis Gene Families AT5G48930 27.964 5.23e-55 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2081 K15400 - gmx:100801822 667.537