Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1951 ATGGTGTCATTTCTCCACTTAGTTCTAGCTCTTCCTCTATTGAGTTTCATCATCCTCTTATTGAAATCTAGAACCAATAAGAAACCAGCAACCGTTCTACCAGGTCCAAAAGGCCTTCCTATCATTGGTAATCTTCATCAACTAGACAATTCAGGTCTCCATTTCCAACTGTTGAACCTCTCAAAAATCTATGGTCCCATTTTTTCTCTTCGTATTGGGATGAGGCCTGCCATTGTTATATCCACACCCGGAGTAGCAAAAAAGATCCTAAATGACCATGACCTTGATGTTGCCAGGAGACCTCCCAATCTTGGCAACCAAAAAATCTCTTACAATGGGACAGAGATAATATTTTCTCCCTACAATGATACTTGGAGAGAGATTAGAAAACTTGCTGTTGTCCATTTCTTAAGCTTTAAAAAGGTCTCTATGTTTTCCCATGTAAGAAAAGATGAGGTCAAAAAAATGATCAAAAAGATATCAGGGCATGTTTGTTCTTCCAAAATAACAAATCTGAGTGAGATAGTATTGTCTACCTCTATCTCTATAATTTGGAGAATTGGTTTTGGGAGAAAGTGTGGCGAGGAAGGAGCTGAAAAAAGCAGGCTCCATGGGCTTCTTAATGAGACAGAGGACATCTTCACTTCCTTCTTCATTTCAGATCACATTCCTTTCATGGGATGGATCGATAGACTCACAGGGTTACGTGCTCGTGTTGAAAATGCTTTCAAGAGAATGGATATGTTTTCCCAAGAAGTCCTTGACGAGCACCTTGATCCTAATAGACTGAAGGAAACTGAAGAGGGGGATATAGTTGATGTGTTACTAGGGCTTCAGAAGCAGGGTAACCTCTCAATAGATCTCACTCATGATCATATCAAAGGTGTCATAATGGATCTAATTGTAGCAGGAACTGACACAAGTGCATCCACAGCAGTTTGGGTGATGACTGCATTAATGAAGTACCCAAGAACAATGAAGAAAGCTCAAGAAGAAGTAAGAAATCTTTATGGAAACAAAGATTTCATCGATGAAGAGGATATTCAAAACCTGAAATATTTGAAGGCAGTGATAAAAGAGGCATTGAGATTGTATCCAACAGCACCAGTACTACCCAGGGAAACCAATAAAGGTTTCATTATAGATGGGTATGAAATACAACCCAAGACCTTGGTGTATGTGAATATTTGGGCTATCCATAGAGACCCTGAGGCCTGGAAAGACCCAGATGAGTTCTATCCTGAGAGATTTTTAAACAATGATATAGATTTTAAGGGAAGAGATTTTGAGCTAATTCCATTCGGCGCTGGACGTAGAATTTGCCCTGGCCTTCCAATGGGAATTGCCACAGTGGAACTCATAATTGCCAATCTACTAAACTCATTTGACTGGGAATTGCCTATTGGGATGGCACCAGAAGACATAGATGTTGAAGCGCTACCTGGACTTGCCGTACAAAAGAAAAATCATCTTTGTCTTGTTGCAAAGAATCGAAAATGA 1500 0.3987 MVSFLHLVLALPLLSFIILLLKSRTNKKPATVLPGPKGLPIIGNLHQLDNSGLHFQLLNLSKIYGPIFSLRIGMRPAIVISTPGVAKKILNDHDLDVARRPPNLGNQKISYNGTEIIFSPYNDTWREIRKLAVVHFLSFKKVSMFSHVRKDEVKKMIKKISGHVCSSKITNLSEIVLSTSISIIWRIGFGRKCGEEGAEKSRLHGLLNETEDIFTSFFISDHIPFMGWIDRLTGLRARVENAFKRMDMFSQEVLDEHLDPNRLKETEEGDIVDVLLGLQKQGNLSIDLTHDHIKGVIMDLIVAGTDTSASTAVWVMTALMKYPRTMKKAQEEVRNLYGNKDFIDEEDIQNLKYLKAVIKEALRLYPTAPVLPRETNKGFIIDGYEIQPKTLVYVNIWAIHRDPEAWKDPDEFYPERFLNNDIDFKGRDFELIPFGAGRRICPGLPMGIATVELIIANLLNSFDWELPIGMAPEDIDVEALPGLAVQKKNHLCLVAKNRK* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1951 499 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1951 499 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1951 499 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1951 499 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1951 499 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1951 499 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1951 499 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1951 499 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 5 497 - -
Lja1g1951 499 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1951 499 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1951 499 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1951 499 Pfam Cytochrome P450 34 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1951 499 SUPERFAMILY Cytochrome P450 34 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1951 499 PANTHER CYTOCHROME P450 71B11-RELATED 5 497 - -
Lja1g1951 499 Gene3D Cytochrome P450 25 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1951 499 Coils Coil 326 346 - -
Lja1g1951 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1951 Lja-Chr1 22308818 22310603 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1951 5 494 Cytochrome P450 AT4G31500 47.166 1.49e-158 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1951 - - gmx:100806470 663.685