Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1950 ATGGTGTCATTTCTCCACTTAGTTCTAGCTCTTCCTCTATTGAGTTTCATTATCCTCTTATTGAAATCTAGAACCAATAAGAAACCAGCAACCGTTCCACCAGGTCCAAAAGGCCTTCCTATCATTGGTAATCTTCATCAACTTGACAACTCAAGTCTCCATTTCCAATTGTTGAACCTCTCAAAAATCTATGGTCCCATTTTTTCCCTTCGTATTGGGTTGAGGCCTGCCATTGTTATATCCACACCCGGAATAGCAAAAAAGATCCTAAATGACCATGACCTTGATGTTTCCAGGAGACCTCCCAATCTTGGCAACCAAAAAATCTCTTACAATGGAATAGAGATAATATTTTCTCCCTACAATGATACTTGGCGAGAGATTAGGAAACTTGTTGTTGTCCATTTCTTAAGCTTCAAAAAAGTCAAAAAAATGATCAAAAAGATATCAGGGCATGTTTGTTCTTCCAAAATCACAAATCTGAGTGAGATAGTATTGTCTACCTCTATCTCTATAATCTGGAGGATTGGTTTTGGGAGAAAGTGTGATGAGGAAGGAGCTGAAAAAAGCAGGATCCATGGGCTTCTTAATGAGACGGAGGACATCTTCACATCCTTCTTCATTTCAGATCACATTCCTTTCATGGGATGGATCGATAGACTCACAGGGTTACGTGCTCGAGTTGAAAATGCTTTCAAGAGAATGGATATGTTTTCCCAAGAAGTCCTTAACGAGCACCTTGATCCTAATAGACCAAAGGAAACTGAAGAGGGGGATATAGTTGATGTGTTACTACGACTTCAGAAGCAGGGTCACCTCTCAATAGATCTCACCCATGATCATATCAAAGGTGTCATAATGGATCTAATTGTAGGAGGAACTGACACAAGTGCATCCACATCAGTTTGGGTGATGACTGCATTAATGAAGTACCCAAGAACAATGAAAAAAGCTCAAGAAGAAGTAAGAAATCTATATGGAAACAAAGAGTTCATCGATGAAGAGGATATTCAAAAGCTTAAATATTTGAAGGCGGTGATAAAAGAGACATTTAGATTATATCCAACAGCACCACTACTACCAAGGGAAACCAATAAGAGTTTCATTGTAGATGGGTATGAAATACAACCCAAGACCTTGGTGTATGTGAATACTTGGGCTATCCATAGAGACCCTGAGGCTTGGAAAGACCCAGATGAGTTCTATCCTGAAAGATTTTTAAACAATGATATAGATTTTAAGGGAAGAGATTTTGAGCTAATTCCATTCGGCGCTGGACGTAGAATTTGCCCTGGCCTTCCAATGGGAATTGCCACAGTGGAACTCATAATTGCAAATCTACTAAACTCATTTGATTGGGAATTGCCTATTGGGATGGCACCAGAAGACATAGATGTTGAAGGGCTACCTGGACTTGTCGTACAAAAGAAAAATCATCTTTGTCTTGTTGCAAAGAACCGAAAATGA 1467 0.3933 MVSFLHLVLALPLLSFIILLLKSRTNKKPATVPPGPKGLPIIGNLHQLDNSSLHFQLLNLSKIYGPIFSLRIGLRPAIVISTPGIAKKILNDHDLDVSRRPPNLGNQKISYNGIEIIFSPYNDTWREIRKLVVVHFLSFKKVKKMIKKISGHVCSSKITNLSEIVLSTSISIIWRIGFGRKCDEEGAEKSRIHGLLNETEDIFTSFFISDHIPFMGWIDRLTGLRARVENAFKRMDMFSQEVLNEHLDPNRPKETEEGDIVDVLLRLQKQGHLSIDLTHDHIKGVIMDLIVGGTDTSASTSVWVMTALMKYPRTMKKAQEEVRNLYGNKEFIDEEDIQKLKYLKAVIKETFRLYPTAPLLPRETNKSFIVDGYEIQPKTLVYVNTWAIHRDPEAWKDPDEFYPERFLNNDIDFKGRDFELIPFGAGRRICPGLPMGIATVELIIANLLNSFDWELPIGMAPEDIDVEGLPGLVVQKKNHLCLVAKNRK* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1950 488 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 5 486 - -
Lja1g1950 488 Pfam Cytochrome P450 33 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1950 488 PANTHER CYTOCHROME P450 71B11-RELATED 5 486 - -
Lja1g1950 488 PRINTS P450 superfamily signature 292 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1950 488 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1950 488 PRINTS P450 superfamily signature 421 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1950 488 SUPERFAMILY Cytochrome P450 33 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1950 488 Coils Coil 315 335 - -
Lja1g1950 488 PRINTS E-class P450 group I signature 344 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1950 488 PRINTS E-class P450 group I signature 281 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1950 488 PRINTS E-class P450 group I signature 301 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1950 488 PRINTS E-class P450 group I signature 430 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1950 488 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1950 488 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1950 488 PRINTS E-class P450 group I signature 168 186 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1950 488 PRINTS E-class P450 group I signature 420 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1950 488 Gene3D Cytochrome P450 25 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1950 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 423 432 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1950 Lja-Chr1 22287252 22289016 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1950 5 483 Cytochrome P450 AT4G31500 45.951 1.50e-152 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1950 - - gmx:100806470 649.047