Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1949 ATGGTGTCCTTTCTGCATTTACTTCTAGCTCTTTCTCTTTTTGTTTTCATTATCCTGTTCAAGAAATCTAAGAAACCATCAACCCTTCCACCAGGTCCAAGAGGCATTCCCATCATAGGTAATCTTCATCAACTAGACACTTCAAATCTCCATTTGCAACTATGGAACCTCTCAAAAATCTATGGCCCCTTTTTCTCCCTTCAAATTGGCTTGAAGCAAGCTATTGTTATTTCCACACCAAAACTTGCCCAAAAGGTCCTCAATGACCATGGTCTTCATGTTTCCAGCAGACCCCCCTCTCTTGGTTCACAAAAGTTATCTTACAATGGATTAGACATGATTTTTTCTCCATATAATGATTACTGGAGAGAAATCAGAAAAATTTGTGTGGTCCATTTCTTTAGCTCCAAAAAAGTCTCTAGTTTTTCCCATATAAGAAAACATGAGGTCAAGGAAATGATCAAAAAGATCTCAGGGCATGTTTGTTCTTCCAAAATCACGAACCTGAGTGAGATCATAATGTCGGTCTCCAGCTCTATTATCTGCAGGATTGCTTTTGGGAGAAAGTATGACGAGGAAGGAGCTGAAAAAAGCAGGTTCCATGGGCTTCTTAATGAGACACAGGATATCTTCACTTCCTTCTTCATTTCAAATCACATTCCTTTTCTGGGGTGGATCGATAGACTCACAGGATTACTCGCTCGTCTTGAAAACACTCACAAGGGATTGGATGCGTTTTTCCAAGAAGTCCTTAACGAGCATCTCGATCCTAATAGGAAGAAAGAAGCTGAAGAGGATGACGATGTAGTTGATGTGATGCTTGAGCTTCAGAAGCAGGGTCACCTCTCAATTGATCTCACCCATAATCATATCAAAGCTATCATGTTGGACCTACTAGTTGCAGCAACTGACACAAGTGCAGCCACATCAGTTTGGGTAATGACTGGATTGATGAAGAACCCAAGAGTAATGAAAAAAGCTCAAGAAGAAGTTCGAAATCTTTACGGCAAGAAAGATTTCATTGATGAAGAAGATATTCAAAAGCTTATATATCTGAAGGCAGTGATAAAAGAGACACTGAGATTTTACGCACCAGCACCACTAGTACCGAGGGAAGTGAATAGAAGTTTCATGATAGATGGGTATGAAATACTTCCCAAGACATTGGTATATGTGAATGTTTGGGCGATCCATCAGGACCCTGAGGCTTGGGAAGACCCGGAAGAGTTCTATCCTGAGAGATTCTTAAACAATGATAGAGATTTTAAAGGACAAGATTTTGAGTTGATTCCATTCGGCGCGGGGCGTAGAATTTGCCCAGGCATACCAATGGGAATTGCCACGGTGGAACTTATTACTGCAAACCTTGTTAATTCATTTGATTGGGAAATGCCTACTGGAATGACACCGAAAGACATAGATATTGAAGGGCTACCAGGACTTGCCCGACACAAGAAGAATCATCTTTGTCTTGTTGCCAAGAACTCTATGTGA 1494 0.4076 MVSFLHLLLALSLFVFIILFKKSKKPSTLPPGPRGIPIIGNLHQLDTSNLHLQLWNLSKIYGPFFSLQIGLKQAIVISTPKLAQKVLNDHGLHVSSRPPSLGSQKLSYNGLDMIFSPYNDYWREIRKICVVHFFSSKKVSSFSHIRKHEVKEMIKKISGHVCSSKITNLSEIIMSVSSSIICRIAFGRKYDEEGAEKSRFHGLLNETQDIFTSFFISNHIPFLGWIDRLTGLLARLENTHKGLDAFFQEVLNEHLDPNRKKEAEEDDDVVDVMLELQKQGHLSIDLTHNHIKAIMLDLLVAATDTSAATSVWVMTGLMKNPRVMKKAQEEVRNLYGKKDFIDEEDIQKLIYLKAVIKETLRFYAPAPLVPREVNRSFMIDGYEILPKTLVYVNVWAIHQDPEAWEDPEEFYPERFLNNDRDFKGQDFELIPFGAGRRICPGIPMGIATVELITANLVNSFDWEMPTGMTPKDIDIEGLPGLARHKKNHLCLVAKNSM* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1949 497 Gene3D Cytochrome P450 22 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1949 497 SUPERFAMILY Cytochrome P450 30 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1949 497 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1949 497 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1949 497 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1949 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Lja1g1949 497 PANTHER CYTOCHROME P450 71B11-RELATED 5 497 - -
Lja1g1949 497 Pfam Cytochrome P450 30 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1949 497 Coils Coil 324 344 - -
Lja1g1949 497 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1949 497 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1949 497 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1949 497 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1949 497 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1949 497 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1949 497 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1949 497 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1949 497 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja1g1949 497 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 5 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1949 Lja-Chr1 22274914 22276950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1949 8 492 Cytochrome P450 AT4G31500 46.421 7.86e-159 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1949 - - gmx:100806470 688.723